Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., MATE family efflux transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  112 bits (279), Expect = 3e-29
 Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 11/406 (2%)

Query: 14  DFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVT 73
           + F +   +A P+ L  +      + D LM+GQ G   +AA  +      +T +  +GV+
Sbjct: 8   EHFSKNFTLAYPVVLSQLGHILVSVFDSLMVGQTGTLPLAAASLGNSIFTITLVFGLGVS 67

Query: 74  TGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNA 133
                L A   G  +   +     L  LVSN      + +  +F    +++      V  
Sbjct: 68  YSITPLIAAADGRHNYTRI-SLLLLNGLVSNVLLGILLFIVGYFLSPYITVLDQPANVVE 126

Query: 134 LGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGF 193
           L   Y+ +   +M  +    +       +     + + S +    N+VLN+ILIFGK GF
Sbjct: 127 LAVPYINVLFLSMVPLMVFQAFRQFAEGLSLTKQAMYISIVANALNIVLNYILIFGKLGF 186

Query: 194 PAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPT 253
             MG+ GA  AT++S  +    + +++   K    F        + +  + R  +L LP 
Sbjct: 187 EPMGLLGAGWATLISRVVMALAMAAWVLYAKRFAVFRRFLRLRHLSFIHMYRIYKLGLPI 246

Query: 254 TFNFLIWAAGLFTYHAIM-GQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLG 312
           +   +I+  G F++ AIM G  G + LAA  +   + S++  +  G++ AA + VGNQ G
Sbjct: 247 S-GQMIFEMGAFSFSAIMIGWLGARELAAHQIAINIASVTYMMASGIAAAATIRVGNQKG 305

Query: 313 AKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTAL---TPETRELSEKFMLI 369
             N++A+          ++ +G+V  IG  L+ +        L    P   +L+   ++I
Sbjct: 306 LGNFDAMRMAGFS----NIAMGVVFMIGSGLLMVLFKNYIPMLYIDDPAVIQLASGLLVI 361

Query: 370 LCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAF 415
             L  +     +  + G LR   DV+      +VA W IG+P+  F
Sbjct: 362 AALFQISDGIQVVGL-GALRGLEDVRIPSLISLVAYWVIGLPVGYF 406



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 7/206 (3%)

Query: 8   LSHMRGDFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTI 67
           L H+      R+  + LPI+ Q I          +M+G LG  E+AA  +A     VT +
Sbjct: 228 LRHLSFIHMYRIYKLGLPISGQMIFEMGAFSFSAIMIGWLGARELAAHQIAINIASVTYM 287

Query: 68  MLVGVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTD 127
           M  G+     +      G G+   +R +      +   F   + LL + F   I  L  D
Sbjct: 288 MASGIAAAATIRVGNQKGLGNFDAMRMAGFSNIAMGVVFMIGSGLLMVLFKNYIPMLYID 347

Query: 128 SEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGI-VSNVVLNWIL 186
              V  L S  L+I +    +          LR +    + +  S +   V  + + + L
Sbjct: 348 DPAVIQLASGLLVIAALFQISDGIQVVGLGALRGLEDVRIPSLISLVAYWVIGLPVGYFL 407

Query: 187 IFGKFGFPAMGI-----QGAAIATVL 207
            F K GF   GI      G ++A VL
Sbjct: 408 CF-KAGFGVDGIWMGLLVGLSVAAVL 432



 Score = 28.1 bits (61), Expect = 6e-04
 Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 32/174 (18%)

Query: 141 ITSFTMFAVACVSSMAVGLR-------AMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGF 193
           +T      +A  +++ VG +       AM   G S     +G+V  +    +++  K   
Sbjct: 284 VTYMMASGIAAAATIRVGNQKGLGNFDAMRMAGFSNI--AMGVVFMIGSGLLMVLFKNYI 341

Query: 194 PAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPT 253
           P + I   A+  + SG + IA L+    G   +   G   ++ + D         + +P+
Sbjct: 342 PMLYIDDPAVIQLASGLLVIAALFQISDG---IQVVGLGALRGLED---------VRIPS 389

Query: 254 TFNFLI-WAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVL 306
             + +  W  GL   + +  + G            V+ I + LL+G+S AA +L
Sbjct: 390 LISLVAYWVIGLPVGYFLCFKAGFG----------VDGIWMGLLVGLSVAAVLL 433