Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., putative efflux protein, MATE family from Enterobacter asburiae PDN3

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 94/415 (22%), Positives = 175/415 (42%), Gaps = 28/415 (6%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           R+L+A+A+P+ +  +  ++ G VD +M G     ++AAV +       T+I L  +  G 
Sbjct: 5   RQLLALAIPVIVAQVAQTAMGFVDTVMAGGYSATDMAAVAIG------TSIWLPAILFGH 58

Query: 77  ALLTA------QYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSL-----T 125
            LL A      Q  G+G R+ +       + ++ F +   +++       I ++      
Sbjct: 59  GLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMVVLWNAGHIIRAMHNIDPA 118

Query: 126 TDSEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWI 185
              + V  L +       +  F VA   +   GL A  KPG+   F  IG++ N+ +N++
Sbjct: 119 LADKAVGYLRALLWGAPGYLFFQVA--RNQCEGL-AKTKPGMVMGF--IGLLVNIPVNYV 173

Query: 186 LIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISR 245
            I+G FG P +G  G  +AT     +    + +++   + +     +   +  DW  ++R
Sbjct: 174 FIYGHFGMPELGGVGCGVATAAVYWVMFFSMIAFVKRARSMRDIRNEKRFSTPDWNIMTR 233

Query: 246 FLRLSLPTTFNFLIWAAGLFTYHAIM-GQTGVQGLAALSVMTPVESISLSLLIGMSTAAA 304
            ++L LP     L +   LF   A++    G+  +A   +     S+   L + ++ A  
Sbjct: 234 LVQLGLPIAL-ALFFEVTLFAVVALLVSPLGIVNVAGHQIALNFSSLMFVLPMSLAAAVT 292

Query: 305 VLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQI-PVLGAFTALTPETRELS 363
           + VG +LG  +   +  Q    T   V V + V   L+ V +   +       PE   L+
Sbjct: 293 IRVGFRLGQGS--TLDAQTAARTGLGVGVCMAVCTALFTVALREQIALLYNDNPEVVALA 350

Query: 364 EKFMLILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAAL 418
              ML+  +  +  S  +    GVLR   D +       +A W +G+P     AL
Sbjct: 351 SHLMLLAAIYQISDSIQVIG-SGVLRGYKDTRSIFFITFIAYWVLGLPAGYILAL 404