Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., multidrug efflux MATE transporter MdtK from Escherichia coli ECRC62

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 33/424 (7%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           R L+A+A+P+ L  I  ++ G VD +M G     ++AAV +       T+I L  +  G 
Sbjct: 9   RLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIG------TSIWLPAILFGH 62

Query: 77  ALLTA------QYWGAGDRKGVRESTALTWLVSNFFAFFTVLL-----FLFFPQQIMSLT 125
            LL A      Q  G+G R+ +       + ++ F +   +L+     ++    + +   
Sbjct: 63  GLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPA 122

Query: 126 TDSEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWI 185
              + V  L +       +  F VA   +   GL A  KPG+   F  IG++ N+ +N+I
Sbjct: 123 LADKAVGYLRALLWGAPGYLFFQVA--RNQCEGL-AKTKPGMVMGF--IGLLVNIPVNYI 177

Query: 186 LIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISR 245
            I+G FG P +G  G  +AT     +    + SY+   + +     +   A  D   + R
Sbjct: 178 FIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKR 237

Query: 246 FLRLSLPTTFNFLIWAAGLFTYHAIM-GQTGVQGLAALSVMTPVESISLSLLIGMSTAAA 304
            ++L LP     L +   LF   A++    G+  +A   +     S+   L + ++ A  
Sbjct: 238 LIQLGLPIAL-ALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVT 296

Query: 305 VLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTAL---TPETRE 361
           + VG +LG    +     A       ++VG+ +A    +  + +      L    PE   
Sbjct: 297 IRVGYRLG----QGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVT 352

Query: 362 LSEKFMLILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAALV-L 420
           L+   ML+  +  +  S  +    G+LR   D +        A W +G+P     AL  L
Sbjct: 353 LAAHLMLLAAVYQISDSIQVIG-SGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDL 411

Query: 421 KVEP 424
            VEP
Sbjct: 412 VVEP 415