Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., MATE family efflux transporter from Dickeya dianthicola ME23

 Score =  100 bits (248), Expect = 1e-25
 Identities = 109/442 (24%), Positives = 196/442 (44%), Gaps = 45/442 (10%)

Query: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76
           R L+A+A+P+ +  +  +S G+VD +M G     ++AAV V       T+I L  +  G 
Sbjct: 9   RHLLALAIPVIIAQVSQTSMGVVDTIMAGSYSATDMAAVAVG------TSIWLPAILFGH 62

Query: 77  ALL------TAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTD--- 127
            LL       A   G+G R  +   T   +L++   +  T+++ L+  + +++L  D   
Sbjct: 63  GLLMALTPVVANLNGSGRRDRIAHQTQQAFLLAAAISILTMIV-LYQGKYVINLMHDGAP 121

Query: 128 ---SEQVNALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNW 184
               + V  L +    +  +  + V  + S   GL +  KPG+   F  IG++ N+ +N+
Sbjct: 122 ELADKAVKYLHALLWGVPGYLFYQV--LRSQCEGL-SKTKPGMVIGF--IGLLINIPINY 176

Query: 185 ILIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAV-----ID 239
           + I GK G P +G  G  +AT     + +  + +Y    +H  A+  +DI+        D
Sbjct: 177 VFIHGKLGMPELGGVGCGVATASVYWMMMLMMAAY---SRH--AYWLKDIRQFKPQLKPD 231

Query: 240 WPKISRFLRLSLPTTFNFLIWAAGLFTYHAIMG-QTGVQGLAALSVMTPVESISLSLLIG 298
           W  + R   + LP     L++   LF   A++    GV  +A   +     S+   L + 
Sbjct: 232 WAVLKRLSSMGLPIAL-ALLFEVTLFAIVALLVLPLGVVNVAGHQIALNFSSLMFVLPLS 290

Query: 299 MSTAAAVLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLGAFTALTPE 358
           +  AA + VG++LG  + EA    A    A  VL+ +  AI    ++ P+   +    P+
Sbjct: 291 VGVAATIRVGHRLGEGSAEAARVAARTGIATGVLLAMCTAIFTITLREPIAMLYNK-NPD 349

Query: 359 TRELSEKFMLILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIP----LAA 414
              ++   ML+  +   +     T   GVLR   D +       +A W +G+P    LA 
Sbjct: 350 VVAMASHLMLLAAV-YQISDAVQTIGSGVLRGYKDTRAIFFITFIAYWLLGLPSGYALAL 408

Query: 415 FAALVLKVEPE---WIYLLFLT 433
              LV ++ P    W +++ LT
Sbjct: 409 TDILVPRMGPAGFWWGFIIGLT 430