Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., MATE family efflux transporter from Dickeya dadantii 3937

 Score =  114 bits (284), Expect = 9e-30
 Identities = 102/409 (24%), Positives = 184/409 (44%), Gaps = 15/409 (3%)

Query: 11  MRGDFFRRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLV 70
           ++G   R LI + +P+ L N++ S   + D   +G+LG+  +AA+ V+    F+   + +
Sbjct: 14  LQGSILRALIKMGVPVILANLLQSGYIMTDAFWVGRLGDKAVAAISVSQPIIFLAFALGI 73

Query: 71  GVTTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAF-FTVLLFLFFPQQIMSLTTDSE 129
           G++  G  L AQ  GA   +      A  +++S  F+   +V+ +   P  + +L T  E
Sbjct: 74  GLSIAGTTLVAQCIGARLHQDANAIAAQVFMLSLLFSIPISVVGYFLTPWMLHTLGT-QE 132

Query: 130 QVNALGSQYL--IITSFTM-FAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWIL 186
            V  L   +L  +I+     F  A + S+  G   +  P + T  +   ++ N +++ + 
Sbjct: 133 DVFPLALSFLRVLISGLVFTFGFAMLQSLMRGAGEVRIPLLITLGT---LILNAIMDPLF 189

Query: 187 IFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRF 246
           IFG    PA G+ GA IAT+++  I +   +  L   +  +   +  +K   D   +   
Sbjct: 190 IFGYGIIPAFGVTGAGIATLINQGIAMVAGFLALRFSRISLKIYFCAMKPRFD--MVKSV 247

Query: 247 LRLSLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVL 306
           +RL +P +      A G     +++   G    AA  V+  + ++ +   IGMS A A L
Sbjct: 248 VRLGMPASIELCAHALGASGMMSLVTGLGTAVTAAYGVVININALVIVPAIGMSIATATL 307

Query: 307 VGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGL--YLVQIPVLGAFTALTPETRELSE 364
           VG  +GA  +E    +AIG  + ++       IGL  +     ++G F     +      
Sbjct: 308 VGQNVGAGKFERA--RAIGRLSATISFLTQTMIGLTGFAFAPDIIGLFAPEQTQVINHGT 365

Query: 365 KFMLILCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLA 413
            F  I+  G  L    M A+ G  RA G     +   +++QW + IPLA
Sbjct: 366 LFFHIIAPGYGLIGLQM-ALNGAFRATGRTMTTMTLALISQWLVQIPLA 413