Pairwise Alignments

Query, 223 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  150 bits (379), Expect = 2e-41
 Identities = 84/219 (38%), Positives = 129/219 (58%), Gaps = 2/219 (0%)

Query: 1   MLQLIDLCKGYVDGDEFHPVLQGAELTLNQGDQLALMGESGSGKSTLLNLIAGLDSADSG 60
           +LQ  +LCK Y +G     VL     ++ +G+ +A++G SGSGKSTLL+L+ GLD+  SG
Sbjct: 5   LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64

Query: 61  EIWFPGFPMHHTSEHHRTAFRRDNIGQIFQQYNLLPTLNIADNIRFCRQL--KGLPEDAG 118
           ++ F G PM   S   +   R   +G I+Q ++LLP     +N+     +  K   E   
Sbjct: 65  DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124

Query: 119 LWRQILSALDLMPLLGRYPEEVSGGQQQRAAIARALYMEPKILLADEPTGSLDERNAEAV 178
              ++L A+ L       P E+SGG++QR AIARAL   P+++LADEPTG+LD RNA+++
Sbjct: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184

Query: 179 MRLLTTLTRQLNCALLLVTHSEKVAQHMDGCIRLQGGQL 217
            +LL  L R    A L+VTH  ++A+ M   + ++ G+L
Sbjct: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223