Pairwise Alignments

Query, 836 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 817 a.a., ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  330 bits (845), Expect = 3e-94
 Identities = 253/833 (30%), Positives = 410/833 (49%), Gaps = 51/833 (6%)

Query: 25  VKALLGHYRRYPLQICLVWLGLTLGVSLLVGVTAINHHARQSYEHGEKLFSNPLPYRIRS 84
           ++ALL H+RR+ LQ   ++ GL L  +L  GV A+N  AR  Y     + + P   ++ +
Sbjct: 8   LQALLSHWRRHRLQFFSIFTGLWLATALWTGVQALNSQARADYARASAVLAGPAQAQLVA 67

Query: 85  KHIANKIPQGLYIQLRRDGFQQCVPFDD-YRFSTTSGLDLILQGIDPVALLSIDN--GKP 141
           +    +  Q LY+QLR+ G+Q     +   RF+    L + L GI+P++L +     G  
Sbjct: 68  RS-GERFDQSLYLQLRKLGWQLSPVLEGRLRFAGEQPLTVRLIGIEPLSLPAAMTVAGTS 126

Query: 142 LAQQSGLQLMNPPYPVMVSQELAKLQDWQEGDYIALTDGSQLGPIVIDRHNQVTGMRVVA 201
           L        +  P    V  +  +            +DG  L P+V+    Q+    +V 
Sbjct: 127 LQGFDLQAFIGMPGQAWVGPDTLRQLGVDATGRATSSDGQVLPPLVVQP--QLAPGVIVV 184

Query: 202 DLSLVRMLKKGSG-LTVIACAD----MPPAKLDKLKKSLPNGLTLTRSTRSELESLTQAF 256
           D+   + L    G L+ +   D    +P A  ++L    P       S   +L+ LT +F
Sbjct: 185 DIGHAQALLHAPGKLSRLLVGDEARPLPAAFAERLTLHAP-------SDDGDLQRLTDSF 237

Query: 257 HLNLTAMGMLAFLVGIFIFYQAMSLSMVQRQPLVGTLRQIGVNGWQLAKALLIELLVLVL 316
           HLNLTA+G+LAF+VG+FI + A+ L++ QR+ L+  LR  G++   L  AL++EL V  +
Sbjct: 238 HLNLTALGLLAFVVGLFIAHAAIGLALEQRRGLIRNLRACGISLNTLLIALVLELGVFAV 297

Query: 317 VSWVCGNVLGLLLANQLIPSVASSLGYLYNANV----DLAIGWDWSWSSYSLLMALLAAF 372
           +  + G   G  LA  L+P VA+SL  LY A V    +L   W  +    S+  ALLA  
Sbjct: 298 LGGLAGVASGYGLAALLLPDVAASLRGLYGAQVAGQLNLPAWWWLAGVVVSVFGALLAGV 357

Query: 373 AS----CTWPLVRLLRSQPIRLSARLSLVRFAGKEFKLQALLACALCVAAVAIYQAPKSQ 428
           +S       PL+ L + Q  RL+         G   + QAL A  L   A+  +Q   S 
Sbjct: 358 SSVLRAARLPLLALAQPQAWRLA--------QGPWLRRQALAAGLLLAVALGCWQWGNSL 409

Query: 429 QSGFAIIGLMLLSVALFTPYIIWTLFTSFSYTLRWVKVRWFFADAAASMSYRGVATMAFM 488
            S   ++  +LL+ AL  P ++ +     +   R    +WF AD+   +    +A MA +
Sbjct: 410 ASALLLLATLLLAAALLLPALLESALAWLARLCRGPLAQWFVADSRQQLPALSLALMALL 469

Query: 489 VALAANIGVETMVGSFRDTTDRWLSQRLAADIYLYPSNSV-ASRMSQWLGQQPEVDAVWW 547
           +ALAA++GV +M   FR T   WL QRL+AD+YL P ++  A +++ WL +QP V  +  
Sbjct: 470 LALAASVGVGSMTEGFRKTFSAWLDQRLSADLYLTPQDTTQALQITDWLARQPAVTTLLP 529

Query: 548 RWEKDFASQQGPVQ---IVSTGASDGELDSLTVKLGVPNYWYHLHHARGVMISESMALKL 604
            W  +   QQ PVQ   I+   A       L  +   P  W  L   R VM+SE +A +L
Sbjct: 530 SWRAEIRLQQWPVQVQGIIDHPAYPARWPLLEQR---PQAWAQLASGRAVMLSEQLARRL 586

Query: 605 GIRPGDLIDLPEPMGSGWAVFGVYYDYGNPYHQVMMSHQNWMKAF---AGTGNVALAVVL 661
           G++ G  + LP        V G+Y DYGNP   +++ + +W++     A    ++L +  
Sbjct: 587 GVQVGAPLQLP---NQAMTVVGIYADYGNPKGHLLV-NADWLRGHLPEAKLSTISLNLA- 641

Query: 662 KEGLTGESVKKRLDTIFRLDADRIFDNTNIHSHAMRVFDRTFSIAGTLGNITLFIAVCGI 721
            EG+    +K  L   F LD  R+ +  ++   +  +F RTF+    L ++TL +A   +
Sbjct: 642 PEGIA--PLKADLQQRFALDDSRVVEQASLKRWSTEIFSRTFAATTALNSLTLGVAGIAL 699

Query: 722 FFSTLAGETSRLRHISLLRCLGVSGKELVLIGGMQLFVFGAISLLIALPLGLTLAKLVID 781
           F S L    SRL  ++ L  LGV   +LV +   Q  +  ++++L+A+PLGL LA  ++ 
Sbjct: 700 FISLLTLSQSRLGQLAPLWALGVRRTQLVWLSLGQTLMLSSLTVLLAIPLGLLLAWCLVA 759

Query: 782 VVIKHSFGWTMQLQMVPGEYVYTVVWSMMALILAGALPIIRLARKSPMKSLRE 834
           VV   +FGW + L +   + +   +  ++  +LA A P+ +LAR+ P   LR+
Sbjct: 760 VVNVQAFGWRLPLHVFAAQLLQLALLGLLTSLLASAWPLWQLARRQPSALLRQ 812