Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Na(+)/H(+) antiporter NhaA from Xanthobacter sp. DMC5

 Score =  234 bits (596), Expect = 5e-66
 Identities = 146/421 (34%), Positives = 222/421 (52%), Gaps = 57/421 (13%)

Query: 8   FFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLHTYV--------FGMSVSHWINDGL 59
           F ++ES     L++A  +A+ ++NS   + + A   T V        F  S+ HWINDGL
Sbjct: 29  FVRIESMASAALLLATVVALGLSNSPWSKTFLAIWDTRVGLEIGHIRFSRSLQHWINDGL 88

Query: 60  MAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGWA 119
           M +FF ++ LE+KRE++ G L+   T      AA+GGM  PA +++           GW 
Sbjct: 89  MTLFFFVVALELKREIVLGELRDLRTITLSLAAALGGMAVPAALFLLLQ-GGGEGWHGWG 147

Query: 120 IPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTIG 179
           +  ATD AF +G +A+LG RVP+SL++FLL+LAI DD+G ++++A+ Y   +S I + + 
Sbjct: 148 VVMATDTAFVIGALAVLGNRVPLSLRLFLLSLAIFDDMGAILVVAIGYGGTISWIPIALA 207

Query: 180 FIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLKG------ 233
               G++ +++   +  +  Y   G  +W+A+   G+H TLAGV++G   P +       
Sbjct: 208 GAGFGLVAVISRLGIRSIPAYFAIGGAIWLALDAGGIHPTLAGVILGLMTPARSWVSGIR 267

Query: 234 --------------------NKGEH-------------SPLKHLEHALHPYVAFAILPVF 260
                               +KG               SP++ LE  LHP+VAFA++P+F
Sbjct: 268 LHAIFDRVIAYPLDEHWTGDSKGRQDLQRARIAARESLSPIERLEMLLHPWVAFAVMPLF 327

Query: 261 AFANAGISLQGVSLAGLTSMLPLGVALGLFLGKPLGIFSFSWAAVKLGVAKLPEGINFKH 320
           A ANAG+S   +  A     L L V  G  LGKP+GI  FS  AV L + K P  +++  
Sbjct: 328 ALANAGVS---IVPAEFHRGLALAVFAGFVLGKPVGIVMFSAIAVALRLGKRPAELSWGV 384

Query: 321 IFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGILMGSTTAA---LLGYSLLRLSL 377
           + A ++L GIGFTM++FI+ +AF        T A+LGIL  S  +A   LL   LL  S 
Sbjct: 385 LAAGAMLTGIGFTMALFIAEMAF---EGGLLTSAKLGILAASVVSAAGGLLALILLTSSG 441

Query: 378 P 378
           P
Sbjct: 442 P 442