Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Na(+)/H(+) antiporter NhaA 2 from Pseudomonas putida KT2440

 Score =  296 bits (757), Expect = 1e-84
 Identities = 178/413 (43%), Positives = 240/413 (58%), Gaps = 54/413 (13%)

Query: 8   FFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLHT--------YVFGMSVSHWINDGL 59
           F  +E+  GI+L+IAA  A++ ANS   + Y+A  HT        +V+  S+  WINDGL
Sbjct: 23  FLHIEAVSGIVLLIAAVAALIWANSPAADSYEALWHTPLTFGVGSHVYSQSLHFWINDGL 82

Query: 60  MAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGWA 119
           M +FFL++G+E++RE+ EGAL S   A  P  AAVGG+  PAL+Y++F  + PA  QGWA
Sbjct: 83  MTIFFLVVGMEIRREIHEGALSSLRQATLPMAAAVGGVAVPALLYLSFG-HAPADQQGWA 141

Query: 120 IPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTIG 179
           +P ATDIAFA+G++ALLGK +P +++VFLLALAIIDD+  V+IIA FYS  L      + 
Sbjct: 142 VPTATDIAFAVGVLALLGKSIPSNVRVFLLALAIIDDIIAVLIIAFFYSGGLDYTGFGVA 201

Query: 180 FIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPL-------- 231
            I   ++  L    V     Y++ G I+W+ +L +G H TLAGVV+G   P+        
Sbjct: 202 VIGLLMVIGLQKIGVGSAYAYVIPGAIVWLGILLTGAHPTLAGVVLGLMTPVTAMPMRER 261

Query: 232 ----------------KGNKGEHS----PLKHLEHA--------------LHPYVAFAIL 257
                           K  + + S    PLK L  A              LHP+VAF I+
Sbjct: 262 PLDAITRFTGELLGRAKAPEQDASDLMDPLKRLRLAQRELLPPVVRMQGTLHPWVAFGIM 321

Query: 258 PVFAFANAGISLQGVSL-AGLTSMLPLGVALGLFLGKPLGIFSFSWAAVKLGVAKLPEGI 316
           PVFA ANAG+SL GV L A     + + VA+ L  GKPLGI S SW  V+LG   LP  +
Sbjct: 322 PVFALANAGVSLSGVDLSAEGPQWVMIAVAVALVAGKPLGIVSVSWLMVRLGWCVLPAEV 381

Query: 317 NFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGILMGSTTAALLG 369
           N++ I  V +L GIGFTMSIFI++LAF          A+LG+L  S  AA+LG
Sbjct: 382 NWRSIMLVGLLAGIGFTMSIFIANLAFVDPGSL--GAAKLGVLSASLIAAVLG 432