Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Na+/H+ antiporter NhaA type from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  437 bits (1124), Expect = e-127
 Identities = 223/379 (58%), Positives = 285/379 (75%), Gaps = 10/379 (2%)

Query: 8   FFKMESAGGILLVIAAAIAMVIANSAMGEG-YQAFLHTYV--------FGMSVSHWINDG 58
           FF  +++GGI+L+IAAA+AM++AN     G Y  FL T V           ++  WIND 
Sbjct: 7   FFSSDASGGIILIIAAALAMLMANMGATSGWYHDFLETPVQLRVGALEINKNMLLWINDA 66

Query: 59  LMAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGW 118
           LMAVFFLLIGLEVKREL++G+L S   A FP IAA+GGM+ PAL+Y+AFN++DP   +GW
Sbjct: 67  LMAVFFLLIGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYSDPVTREGW 126

Query: 119 AIPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTI 178
           AIPAATDIAFALG++ALLG RVP++LK+FL+ALAIIDDLG +VIIALFY+SDLS ++L +
Sbjct: 127 AIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIVIIALFYTSDLSIVSLGV 186

Query: 179 GFIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLKGNKGEH 238
                 VL +LN   V +  +Y++ G +LW AVLKSGVHATLAGV++GF IPLK   G  
Sbjct: 187 AAFAIAVLALLNLCGVRRTGVYILVGAVLWTAVLKSGVHATLAGVIVGFFIPLKEKHG-R 245

Query: 239 SPLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLGKPLGIF 298
           SP K LEH LHP+VA+ ILP+FAFANAG+SLQGV++ GLTSMLPLG+  GL +GKPLGI 
Sbjct: 246 SPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTIDGLTSMLPLGIIAGLLIGKPLGIS 305

Query: 299 SFSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGI 358
            F W A++  +A LP+G  ++ I AV +LCGIGFTMSIFI+SLAFG  +     +A+LGI
Sbjct: 306 LFCWLALRFKLAHLPQGTTYQQIMAVGILCGIGFTMSIFIASLAFGNVDPELINWAKLGI 365

Query: 359 LMGSTTAALLGYSLLRLSL 377
           L+GS  +A++GYS LR  L
Sbjct: 366 LIGSLLSAVVGYSWLRARL 384