Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Na+/H+ antiporter NhaA from Escherichia coli ECOR27

 Score =  438 bits (1127), Expect = e-127
 Identities = 222/379 (58%), Positives = 288/379 (75%), Gaps = 10/379 (2%)

Query: 8   FFKMESAGGILLVIAAAIAMVIANSAMGEG-YQAFLHTYV--------FGMSVSHWINDG 58
           FF  +++GGI+L+IAA +AM++ANS    G Y  FL T V           ++  WIND 
Sbjct: 7   FFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDA 66

Query: 59  LMAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDPAAIQGW 118
           LMAVFFLL+GLEVKREL++G+L S   A FP IAA+GGM+ PAL+Y+AFN+ DP   +GW
Sbjct: 67  LMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGW 126

Query: 119 AIPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLSTIALTI 178
           AIPAATDIAFALG++ALLG RVP++LK+FL+ALAIIDDLG ++IIALFY++DLS  +L +
Sbjct: 127 AIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLSMASLGV 186

Query: 179 GFIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLKGNKGEH 238
             +   VL +LN   V +  +Y++ G++LW AVLKSGVHATLAGV++GF IPLK   G  
Sbjct: 187 AAVAIAVLAVLNLCGVRRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHG-R 245

Query: 239 SPLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFLGKPLGIF 298
           SP K LEH LHP+VA+ ILP+FAFANAG+SLQGV+L GLTS+LPLG+  GL +GKPLGI 
Sbjct: 246 SPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGIS 305

Query: 299 SFSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQANEAYDTYARLGI 358
            F W A++L +A LPEG  ++ I AV +LCGIGFTMSIFI+SLAFG  +     +A+LGI
Sbjct: 306 LFCWLALRLKLAHLPEGTTYQQIMAVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGI 365

Query: 359 LMGSTTAALLGYSLLRLSL 377
           L+GS ++A++GYS LR+ L
Sbjct: 366 LVGSISSAVIGYSWLRVRL 384