Pairwise Alignments

Query, 382 a.a., Na+/H+ antiporter NhaA from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., Sodium/proton antiporter NhaA from Alteromonas macleodii MIT1002

 Score =  373 bits (957), Expect = e-108
 Identities = 200/385 (51%), Positives = 265/385 (68%), Gaps = 13/385 (3%)

Query: 1   MSDMIRDFFKMESAGGILLVIAAAIAMVIANSAMGEGYQAFLH--------TYVFGMSVS 52
           + D++ DF   E+A GILL+ A  +A++IANS +   Y   +         T+     + 
Sbjct: 17  VQDVVSDFLNREAAPGILLMGATILALIIANSPLDTLYDHLISMPVQISAGTWAIDKPLL 76

Query: 53  HWINDGLMAVFFLLIGLEVKRELLEGALKSRETAIFPAIAAVGGMLAPALIYVAFNFNDP 112
            WINDGLMAVFF  +GLE+KRE+ EG L + +  I PA  AVGGM  PALIYV  N+++P
Sbjct: 77  LWINDGLMAVFFFHVGLELKREICEGELANPKDIILPAAGAVGGMALPALIYVGINWDNP 136

Query: 113 AAIQGWAIPAATDIAFALGIMALLGKRVPVSLKVFLLALAIIDDLGVVVIIALFYSSDLS 172
            AI GWAIPAATDIAFALGI+ALLG RVP SLKVFL+ LAIIDD+G +VIIALFY+  ++
Sbjct: 137 VAIAGWAIPAATDIAFALGILALLGSRVPTSLKVFLVTLAIIDDIGAIVIIALFYTEHIT 196

Query: 173 TIALTIGFIMTGVLFMLNAKHVTKLSIYLVAGLILWIAVLKSGVHATLAGVVIGFAIPLK 232
             AL I      +L+ +N ++V  +  Y+  G+ILW+A+LKSGVHATLAGVV+   IP++
Sbjct: 197 AGALYIAAGCLLLLWQMNKRNVVDIPPYVFVGIILWVAMLKSGVHATLAGVVLAGFIPMR 256

Query: 233 GNKGE-HSPLKHLEHALHPYVAFAILPVFAFANAGISLQGVSLAGLTSMLPLGVALGLFL 291
             K E +SP+  LEH L+  V+FAILP+FAFANAGIS   +S  G+   +  G+ LGL +
Sbjct: 257 DEKDESYSPVTRLEHGLNGSVSFAILPLFAFANAGISFGNISPEGIFHPVTFGIFLGLVV 316

Query: 292 GKPLGIFSFSWAAVKLGVAKLPEGINFKHIFAVSVLCGIGFTMSIFISSLAFGQA--NEA 349
           GK +G+F F +  VKL +AKLPE +NFKHI+  ++LCG+GFTMS+FI  LAF Q   N+ 
Sbjct: 317 GKQIGVFGFCYLMVKLKLAKLPEDLNFKHIYGCALLCGVGFTMSLFIGGLAFAQTGINQI 376

Query: 350 YDTYARLGILMGSTTAALLGYSLLR 374
           +D   R+GIL GS  +A LGY +LR
Sbjct: 377 FD--ERVGILTGSLVSACLGYIVLR 399