Pairwise Alignments

Query, 212 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Outer membrane porin F from Pseudomonas putida KT2440

 Score = 95.9 bits (237), Expect = 8e-25
 Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 5/157 (3%)

Query: 38  PTPLANQIADLQDDDRDGVINARDLCPDTPKGSEIDNDGCGTFVKSSQMQQLHILFANDS 97
           P P+A   +D    D DGV +  D CPDTP    +D DGC    +  +++ L + F  D 
Sbjct: 187 PAPVAEVCSD---SDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVE-LDVKFDFDK 242

Query: 98  SSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL-RY 156
           S ++P     I+ +A+F++ YP T+  ++G+   VG   +N  LS++R+ AV+  L  +Y
Sbjct: 243 SVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQY 302

Query: 157 GVAPERVNIVGYGDSVLEVEGTDDVSHARNRRVTATV 193
           GV   RV+ VGYG++    +   +   A NRRV A V
Sbjct: 303 GVESSRVDSVGYGETRPVADNATEEGRAVNRRVEAQV 339