Pairwise Alignments

Query, 212 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 15/155 (9%)

Query: 50  DDDRDGVINARDLCPDTPKGSEIDNDGC-----------GTFVKSSQMQQLH----ILFA 94
           D+D DG+ + RD CP+TP  + +D+ GC                S ++  L     ++FA
Sbjct: 105 DEDGDGIFDRRDHCPETPANTAVDHMGCPLKQYPAAPPASAPEPSPEVITLDDNGAVMFA 164

Query: 95  NDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVRDQLL 154
            DS+ + PA   +++ + E L +     + + G+   VGS  +N ALS++R+ +V + L+
Sbjct: 165 FDSAELTPAAQQRLQGLVEKLNSPTVAKVRVIGHTDSVGSDSYNQALSERRASSVAEYLI 224

Query: 155 RYGVAPERVNIVGYGDSVLEVEGTDDVSHARNRRV 189
             G+   +V   G G+S    +   +   ARNRRV
Sbjct: 225 GQGLEMGKVTSQGRGESEPVTDNETEEGRARNRRV 259