Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., Outer membrane efflux protein BepC from Xanthobacter sp. DMC5

 Score =  124 bits (311), Expect = 6e-33
 Identities = 93/394 (23%), Positives = 168/394 (42%), Gaps = 1/394 (0%)

Query: 42  SNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDAT 101
           +NP L +     ++ +     +   Y P ++  A  G E      S    N  L  +   
Sbjct: 5   NNPTLNAQRAGTRATDETVPQALSGYRPTLNATAQAGPEFAKQQASGVKTNGWLWPRAFA 64

Query: 102 LTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSE 161
           L     +++G  T N      ++    R  L     ++ L     Y++  +A  +L L  
Sbjct: 65  LNAAYTLFNGFVTANQTRNAESQVRGSRETLRNTEQSVLLNGVTAYMNVIQAIALLELQN 124

Query: 162 NNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVG 221
            +LA  +   R  + R + G  +  DV Q EAR+A A   +  A  NL      +R+++G
Sbjct: 125 KSLAAFQQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQAVANLSTAKANYRQVIG 184

Query: 222 QEPVSLEFPRADQNAIPPTLENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLS 281
            EP  L  PR+ +  +P +++  ++    +HP +K ++  VDAA FQ K ++    P LS
Sbjct: 185 VEPGKLTTPRSIEGTLPVSVDKVISTGLSSHPAVKASEFAVDAAMFQVKVAEGGLMPNLS 244

Query: 282 FEAAQSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFR 341
            +   S   D      S    +  L L   +Y GG +      A   L +++   +    
Sbjct: 245 LQGQLSQSYDQNFSVDSQAGAAMTLNLSVPIYQGGVEYANIRQAKELLTQARIEVDVNRD 304

Query: 342 TVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFE 401
           T+       W AL+    Q Q     V + +  +   R+++++GQRT  D+LN + +L  
Sbjct: 305 TIRAQAVQYWGALEAAKAQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDLTN 364

Query: 402 ARKDYLDARYAEQYAKYRVMNASGNLLDALRVDI 435
           ++   + A+     A Y +++  G  LDAL + +
Sbjct: 365 SQSSLVVAQRDRVVAAYALVSTIGR-LDALSLGL 397