Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Type I secretion system, outer membrane component LapE from Variovorax sp. SCN45

 Score =  101 bits (252), Expect = 4e-26
 Identities = 92/401 (22%), Positives = 171/401 (42%), Gaps = 19/401 (4%)

Query: 15  KAIALAIALSNPVSAQT-----LEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLP 69
           K + +   L+ P +A+T     L  AV   +A +P +  A      +    + +   Y P
Sbjct: 44  KELGIQPGLALPEAAETTTPLELTDAVRQAVARHPSISDAIAMLAQQSGGVDVARAGYYP 103

Query: 70  KIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADR 129
            + +  G G      A   G +     R  AT +++Q+++D       + ++ A+ +  +
Sbjct: 104 LVRVGMGAGVNGGASATQGGGK-----RGVATASVSQMLYDFGKVSGAVGQSEAQVQRQQ 158

Query: 130 YQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVT 189
             +L     +A + A+  +   +   ++ +++  +   + +    + RAD+G+ + AD  
Sbjct: 159 ATVLKQIDAIAQQAAEAVVMTHRYQSLVAIAQEQVQAVEKVLETARLRADAGLSTKADPI 218

Query: 190 QVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQ 249
           Q E+R+  A +NL+  ++ L     +   L+G+       P  +   +   L   L    
Sbjct: 219 QAESRVDSARANLLQVKSQLAQWRERLGTLLGRSVPPRMAPLPEH--LASELRIDLQPDT 276

Query: 250 ENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGI-----EGSSDELSA 304
              P +  A+A+  AA  Q + +KA  YPT+S +A  S     GG+     E S    S 
Sbjct: 277 SLMPEVLAAEAERRAATAQLEVAKAQRYPTISLDA--SVNRPMGGMNSGVPERSGGSHSV 334

Query: 305 MLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFL 364
           ML L   LY GG+   +  +A      ++   E       + +R     +     +   L
Sbjct: 335 MLNLSSVLYQGGALEAQVNTAIAAEQAARMRIETARLNAGDQVRNFREQVIGAQARLGVL 394

Query: 365 ADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKD 405
           AD   S  +    YR+QY +G R++LDLLN E E+ +A  D
Sbjct: 395 ADRRRSIVEARDLYREQYTLGTRSILDLLNAEQEIHQAAAD 435