Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

 Score =  100 bits (250), Expect = 8e-26
 Identities = 95/425 (22%), Positives = 178/425 (41%), Gaps = 14/425 (3%)

Query: 16  AIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDA 75
           A   A  L+ P   QTL +      + +   + A  Q+ +    A  +    LP + L A
Sbjct: 15  ASTFAALLALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAKAGILPAVGLTA 74

Query: 76  GIGYEAINPAESSGN-RNT----DLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRY 130
           G+    I     +G  R T    D   ++  +  TQ ++   A     ++   +A+  R 
Sbjct: 75  GVTRSDIEIDTLTGTGRGTTTPRDFNTQNVGINATQPLYR-PANWATYEQGKRQADIARA 133

Query: 131 QLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQ 190
                  ++ + V++ Y D   + + L L         +     K+  + G  +  D  +
Sbjct: 134 VFTIAEQDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNFEVGTSTITDSRE 193

Query: 191 VEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQE---PVSLEFPRADQNAIPPTLENALNM 247
            +AR     +  +AA+N+L        +LVG+    PV L  P     A+P  +   +  
Sbjct: 194 AQARYDLVTAQEIAAENDLQVKKVVLDQLVGRPGSVPVPLAVPVVLPTALPADINAWVAQ 253

Query: 248 AQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQS-WRNDAG----GIEGSSDEL 302
           A E HP I+ A+  VD A  + +++KA + PTL      +  RN  G     +   ++  
Sbjct: 254 ADEVHPAIQQARLGVDVAGLEVEKAKAGHKPTLDANLGYNVTRNPTGTTTSAVGTRANAT 313

Query: 303 SAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQ 362
           +  +     L+ G +  +R +      ++S+ + E T R V +  R ++  L     Q +
Sbjct: 314 TVGVTFNLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSAYLGLVSGAGQVK 373

Query: 363 FLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMN 422
            L     S+   + + R  YQ+G R  +D+LN++++LF+ ++D   ARY       ++  
Sbjct: 374 ALEAAESSSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQARYNVLLGNLKLRQ 433

Query: 423 ASGNL 427
           A+G L
Sbjct: 434 ANGTL 438