Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Type I secretion system, outer membrane component LapE from Variovorax sp. SCN45

 Score =  100 bits (248), Expect = 1e-25
 Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 27/400 (6%)

Query: 13  PLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKID 72
           P + +  A A + P+   TL +AV  ++A +P +  A +    +    + +   Y P++ 
Sbjct: 49  PGRPLPQAQASTQPL---TLNEAVRQSVARHPSISDAISTLAQQAGGVDVARAGYYPQVR 105

Query: 73  LDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQL 132
           +  G G  +  PA   G+  T      A+ +++Q+++D       + ++ A  +  +  +
Sbjct: 106 VGVG-GGTSNAPASQGGSTGTV-----ASASVSQMLYDFGKVGGAVAQSQALVQRQQAAI 159

Query: 133 LADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVE 192
           L     +A + A+  + A +   +L ++++ +   + +    + RA++G+ + AD  Q E
Sbjct: 160 LKQIDAVAQQAAEAVVMAHRYQSLLAIAQDQVQAVQAVLETARLRANAGLSTKADPIQAE 219

Query: 193 ARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENH 252
           +R+  A +NL+  ++ L     +   L+G   V  E        +P  L  AL++  +  
Sbjct: 220 SRVDSARANLLQVKSQLAQWRERLGTLLGPGVVPPELA-----PLPDDLARALSVDAQPD 274

Query: 253 ----PVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDEL-----S 303
               P +  A+A+  AA  Q + ++A  YPTL+ +AA +     GGI  ++ E      +
Sbjct: 275 ASLLPDVLAAEAERRAASAQLEVARANRYPTLTVDAAVN--KAMGGINPATLERNGTYHT 332

Query: 304 AMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQK-Q 362
            ML L   +Y GG+  D    AA     +  +R +T R        ++    +  Q +  
Sbjct: 333 VMLNLTSVIYQGGA-LDAQVRAATAAEDAARMRIETARLNAGDQARNYREQVVGAQARLG 391

Query: 363 FLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEA 402
            LAD   S  +    YR+QY +G R++LDLLN E E+++A
Sbjct: 392 VLADRRRSIVEARDLYREQYTLGTRSILDLLNAEQEIYQA 431