Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., putative Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 7e-29
 Identities = 106/439 (24%), Positives = 196/439 (44%), Gaps = 29/439 (6%)

Query: 7   NVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGA 66
           N +K   L    L +A+    SA  L+QA  +     P  ++A ++ ++   +       
Sbjct: 9   NDMKRPCLMVCLLGVAVQ--ASAMDLKQAWDLLQYQGPIYRAAVHEKQAGGENRAIGEAG 66

Query: 67  YLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAE 126
            LP+I+  A       +  ++  + + D   K A + L Q +++        +    +  
Sbjct: 67  LLPQINASAYFNQVNGSQRQNGQDNDLDYDSKGANVRLRQPLFNKQKMA---EYRQGQQR 123

Query: 127 ADRYQLLADASNM--ALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGS 184
           AD    + DA +   A+ +A  Y D   ASE +TL++  L+  ++     K+R + G G+
Sbjct: 124 ADYSVAVFDAKSQDAAVRLADAYFDVLLASETITLAKAKLSAFEEQLASAKRRMELGAGT 183

Query: 185 TADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNA---IPPTL 241
             DV +  AR   A ++L+ AQ+NL +   +    +G+ P +L   +A  +    +P  L
Sbjct: 184 ITDVDESVARRDLAEADLIDAQDNLVNARRKLEEYIGETPQALTTLQAGFSTPPLMPGNL 243

Query: 242 ENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDE 301
           +  L  AQ + P+I   +     A  +  ++++ +YPTL F         AG   GSS  
Sbjct: 244 QEWLVKAQADSPLIHARRHSYALAEEEVNRARSGHYPTLDFV--------AGYTAGSSQS 295

Query: 302 LSAM----------LRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSW 351
           +S +          L L   LY+GGS S  +  A+   +++ D  + T + V       +
Sbjct: 296 ISELNQRNHYSSIGLELNIPLYSGGSTSALSRQASANSSKALDELDATRQEVISNTTREY 355

Query: 352 SALDLTLQQKQFLADHVDSASKTVVSYRKQY-QIGQRTLLDLLNTENELFEARKDYLDAR 410
             +     + Q L   V S  +++ S RK + + G  T  D+LN E  L++AR D  +A+
Sbjct: 356 RGVQSGALRIQALEKAVASNERSLTSTRKGFKEGGTSTNSDVLNAEELLYDARHDLFEAK 415

Query: 411 YAEQYAKYRVMNASGNLLD 429
                ++ R+ ++ G+L D
Sbjct: 416 LNYLMSRLRLASSVGSLGD 434