Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 84/390 (21%), Positives = 160/390 (41%), Gaps = 25/390 (6%)

Query: 31  TLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAESSGN 90
           +L  AV      +P +  A      +      +   Y P+I      GY+        G+
Sbjct: 69  SLTDAVLQAAQWHPSIAEAIGNLYKQGEGINVARAGYYPQISGGIRTGYDT----GYGGD 124

Query: 91  RNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDA 150
           RN+        L+L Q+++D     + ++   A A   +  +L    ++A + A  +++ 
Sbjct: 125 RNSQALN----LSLKQMLYDFGKVDSAVNAAQAAAARAQANILLVVDDLARDTAYAWIET 180

Query: 151 TKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLF 210
            +  +++T++ + +    DI    ++R+D G  + +DV Q E+R+  A + L   Q+   
Sbjct: 181 RRYEQLMTIARDQIRGVGDIAGMARQRSDMGASTRSDVVQAESRVESARATLEEYQSQYE 240

Query: 211 DIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALN---MAQENHPVIKVAQADVDAARF 267
              +    L+G+       P A     P  L+ A        +  P + +A A     + 
Sbjct: 241 RWRSTLAALMGRVT-----PPALAEGSPAELDQACKRPAQGDDRLPAVLMALAQRAQGQA 295

Query: 268 QYKQSKAPNYPTLSFEAA------QSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSDR 321
           +  Q+KA  YPTLS +          +  D   ++ +  +    L +   +Y GGS S R
Sbjct: 296 ELAQAKAEAYPTLSLQPQVNHYLDDDYNRDNARLDRT--QAGIYLNVEVPIYQGGSISAR 353

Query: 322 TESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQ 381
           T +A + L  +    +        GL  + +      ++   L     S  +  + Y +Q
Sbjct: 354 TRAAGHALTAADSAEDAARLQARRGLAEAKAQTSGLGRRLTSLEARQVSIQEARMLYGRQ 413

Query: 382 Y-QIGQRTLLDLLNTENELFEARKDYLDAR 410
           Y  +G R LLDLLN E E++++R +    R
Sbjct: 414 YLDLGTRPLLDLLNAEQEIYQSRFELAGTR 443