Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., Type I secretion system, outer membrane component LapE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 97.4 bits (241), Expect = 7e-25
 Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 5/322 (1%)

Query: 106 QLIWDGSATLNDMDRTAAEAEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLA 165
           Q +W G    + +    A   A +  L      + LE  + + ++ + +  L  ++ N A
Sbjct: 88  QPLWTGGRLTSQIALAEANVTASQATLSEAQQAIVLEAGQAFFESLRFNARLQAAQANEA 147

Query: 166 IHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPV 225
            H+ +   I++R  + +  + D TQ  ARL +A S  +  +  L  + +  +++VG +  
Sbjct: 148 EHRRLLDVIERRVKAEVSPSTDATQARARLQQAISERLQFERQLETLRSNLQQIVGAQVE 207

Query: 226 SLEFPRADQNAIPPTLENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAA 285
            L+ PR+      P L+     A  + P     QA ++A++ Q   +K+   P ++    
Sbjct: 208 QLKMPRSVVLGDWP-LDRLREAAWTHSPQRARLQAQIEASQAQIDTAKSALMPQVNL--- 263

Query: 286 QSWRNDAGGIEGSSDELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEE 345
             +    G +    D     L +      G S     E+A  +   S+D  E+  R +E+
Sbjct: 264 -GYDLKLGRLSQGEDRGRVFLGVSLQTGAGLSSLSAVETAVARQQASRDALEQHQRELEQ 322

Query: 346 GLRLSWSALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKD 405
            +R SW+ L   + Q +     + +A + V SY +Q+Q+G+++ LD+LN + E   AR  
Sbjct: 323 SVRTSWNELGSLMTQLEPARSLLGAADEVVESYLRQFQVGRKSWLDVLNAQREKTNARYT 382

Query: 406 YLDARYAEQYAKYRVMNASGNL 427
             D       AK R+M  +G L
Sbjct: 383 LADIEAPLLLAKLRLMVLAGVL 404



 Score = 34.3 bits (77), Expect = 8e-06
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 241 LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFE 283
           L + L  A+ NHP +K+ Q+++ AA    + ++   YP+LS E
Sbjct: 30  LTDVLQEARRNHPSVKIRQSEMRAATLDLQTARWGRYPSLSTE 72