Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., outer membrane channel protein TolC from Pectobacterium carotovorum WPP14

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 102/450 (22%), Positives = 187/450 (41%), Gaps = 33/450 (7%)

Query: 10  KGLPLKAIALAIALSNPVS-AQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYL 68
           K LPL  I L++   + +S A+ L Q      ++NP+L+S+     +       +    L
Sbjct: 3   KLLPL-LIGLSLGGFSAMSQAENLLQVYQQAKSTNPDLRSSAATRDAAFEKINQARSPLL 61

Query: 69  PKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSA-TLNDMDRTAAEAEA 127
           P++ L A   Y          ++  D   K A+L LTQ ++D S      +    A  E 
Sbjct: 62  PQLGLGADYTYNR----GYRDSKGVDSNVKGASLQLTQTLFDMSKWRALTLQEKQAGIED 117

Query: 128 DRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKK---RADSGIGS 184
             YQ      N+ L  A  Y +  +A + L+ +    A  + IYR + +   R + G+ +
Sbjct: 118 VTYQTAQQ--NLMLNTATAYFNVLRAIDSLSYTN---AQKQAIYRQLDQTTQRFNVGLVA 172

Query: 185 TADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQ---EPVSLEFPRADQNAIPPTL 241
             DV    ++     +N V A+N+L +     R++ G    +   L   R      P  +
Sbjct: 173 ITDVQNARSQYDSVLANEVLARNSLDNALESLRQITGNFYPQLAGLNIERFSTQK-PEAV 231

Query: 242 ENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQS----------WRND 291
            N L  A+  +  +  A+   D AR Q + ++    PTL   A+             +N 
Sbjct: 232 NNLLKEAENRNLNLLSARLSQDLAREQIRSAETGYMPTLDLTASTGVSDTRYSGSRTQNS 291

Query: 292 AGGIEGSSDELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSW 351
               +  + +    +     LY+GG+ + + + A +    + +L E   R+V + +R S+
Sbjct: 292 NSFNDSDAGQHKVGINFTLPLYSGGATNSQVKQAQHSYVSASELLESAHRSVIQIVRSSF 351

Query: 352 SALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARY 411
           + +  ++           SA  ++ +    YQ+G RT++D+LN    L+ A++    ARY
Sbjct: 352 NNISASISSINAYKQAEVSAQSSLDAMEAGYQVGTRTIVDVLNATTTLYNAKQQLSSARY 411

Query: 412 AEQYAKYRVMNASGNL----LDALRVDIPQ 437
                +  + +A G L    L AL   + Q
Sbjct: 412 DYLINQLNIKSAQGTLSETDLQALNASLGQ 441