Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., TolC family outer membrane protein from Serratia liquefaciens MT49

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 96/434 (22%), Positives = 197/434 (45%), Gaps = 31/434 (7%)

Query: 19  LAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLD---- 74
           L  A+S PV +  +  A S+ L  +P  ++A  + ++ + +        LPK+  +    
Sbjct: 16  LLFAISAPVHSIGILDAYSLALEKDPTFRAAIKEKEAGDENENIGRAGLLPKVSANYQNS 75

Query: 75  -AGIGYEAINPAESSGNRNTDLTRKD------ATLTLTQLIWDGSATLNDMDRTAAEAEA 127
                 +    ++  GN   + T++       +++TLTQ ++D  A        A    +
Sbjct: 76  PRNWQTQKYPASDIFGNSLGEATKRQQYRSHSSSITLTQPLFDYEAYARYKAGVAQTLMS 135

Query: 128 D-RYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTA 186
           D RY+  +   ++A+ V   Y++   + + + L+    A +K+      +   +G G+  
Sbjct: 136 DERYR--SKYLDLAVRVISAYVEVAYSKDQIALASAQKAAYKEQLALNDRLMSAGEGTIT 193

Query: 187 DVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQ-----EPVSLEFPRADQNA--IPP 239
           DV++ +AR + A +  + A++ L     +   ++G      + + +  P   Q A  IP 
Sbjct: 194 DVSETQARYSLAEAQEIEARDALDAAQRELEVIIGVPLDQLDELQVLRPGKFQVAPLIPS 253

Query: 240 TLENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSS 299
             E    +A EN+P++  ++  VDAA+++ ++++A   P +   A+ S  ND+      +
Sbjct: 254 KFEEWQKIALENNPMLAASRHGVDAAKYEVERNRAGFMPQVQLYASHS-ENDSSSDNTVN 312

Query: 300 DEL---SAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDL 356
            +    S  +++   +Y GG  S  T  AA +  ++    +    T    LR  ++   L
Sbjct: 313 QKYRTDSIGVQVSVPIYAGGGVSASTRQAASRYGQAMYEMDAQVGTTLNDLRKQFN---L 369

Query: 357 TLQQKQFLADH---VDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAE 413
            +  +  LA +   V SA+  V + R+    GQR  +D+LN E +L+ A++D   A+Y  
Sbjct: 370 CISSRAKLAAYELAVKSATTQVTATRQSVLAGQRVNVDVLNAEQQLYSAQRDLASAKYTY 429

Query: 414 QYAKYRVMNASGNL 427
             +   +++ SG L
Sbjct: 430 IKSWITLLSDSGTL 443