Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Type I secretion system, outer membrane component LapE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  102 bits (254), Expect = 3e-26
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 39/414 (9%)

Query: 6   ENVLKGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSG 65
           + +L  L   A  L ++ + P +  TL  AV+  +  +P ++ A  +  ++    E +  
Sbjct: 37  DQMLPSLDGSAAELPLSAAAPGNL-TLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKS 95

Query: 66  AYLPKIDLDAGIGYEAINPAESSGNRNTDLTRKDA-TLTLTQLIWDGSATLNDMDRTAAE 124
            Y P++      GY          N  TD     +  L+++Q+++D     + +    A 
Sbjct: 96  KYYPQVSAGVNNGYS---------NTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAG 146

Query: 125 AEADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGS 184
           A   +  +L     +A E A   +      +++  +E  L     I + I++R+D G  S
Sbjct: 147 AAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATS 206

Query: 185 TADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENA 244
            +DV Q EAR+  A S L   Q NL          +G   ++        N  P  L  +
Sbjct: 207 LSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLN-----GINNDFPAKLARS 261

Query: 245 LNMAQENH---PVIKVAQADVDAARFQYKQSKAPNYPTLSFE-AAQSWRNDAGGIEGSSD 300
              A  +    P +  A A  + AR     + A   PT+S E + Q + ND        D
Sbjct: 262 CETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLD 321

Query: 301 --ELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSK--------DLREKTFRTVEEGLRLS 350
             + S  +++   LY GG  + R  +A++ ++ ++        D+R+K      + + L+
Sbjct: 322 KTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLA 381

Query: 351 WSALDLTLQQKQFLADHVDSASKTVVSYRKQY-QIGQRTLLDLLNTENELFEAR 403
            SAL +  +Q+Q        + +T   Y++QY  +G R LLD+LN E E+++AR
Sbjct: 382 -SALQILRRQQQL-------SERTRELYQQQYLDLGSRPLLDVLNAEQEVYQAR 427