Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Agglutination protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 59/304 (19%), Positives = 135/304 (44%), Gaps = 16/304 (5%)

Query: 147 YLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAKAHSNLVAAQ 206
           Y + +K  E++         +K +         SG+   +D+ +V+  +   ++  +  Q
Sbjct: 4   YYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQ 63

Query: 207 NNLFDIYTQFRRLVGQE--PVSLE----FPRADQNAIPPTLENALNMAQENHPVIKVAQA 260
           + L D   + + + G    PV ++    F    +     + E  ++M  + +   K+   
Sbjct: 64  SMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVN 123

Query: 261 DVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSS--DELSAMLRLRYNLYNGGSD 318
              AA      +K+  +PT+   ++    N +G  + S   DE    + + +N++NG  +
Sbjct: 124 TRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRN 183

Query: 319 SDRTESAAYQLNRSK----DLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASKT 374
           S +        +++K    D   KT   ++  L    +A +     ++    H ++   T
Sbjct: 184 SAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAER---SHTNALQLT 240

Query: 375 VVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLDALRVD 434
            + Y +++Q+GQ++LLDL+++ NE F+A    +D++Y+    K + ++   +L+D L+ +
Sbjct: 241 EL-YEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGN 299

Query: 435 IPQE 438
              E
Sbjct: 300 TESE 303



 Score = 27.3 bits (59), Expect = 7e-04
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 27  VSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAE 86
           +  ++ E+ + + +  N + K   N  K+   D  A+  +Y P +DL +   Y   NP+ 
Sbjct: 99  IFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVS--SYVQNNPSG 156

Query: 87  SS 88
           S+
Sbjct: 157 SA 158