Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 105/416 (25%), Positives = 178/416 (42%), Gaps = 28/416 (6%)

Query: 29  AQTLEQAVSITLASNPEL-KSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYEAINPAES 87
           A+ L Q        NP+L KSA ++  + E   EA S   LP++ L A   Y   N    
Sbjct: 22  AENLLQVYQQARLGNPDLRKSAADRDAAFEKINEARS-PLLPQLGLGADYTYS--NGFRD 78

Query: 88  SGNRNTDLTRKDATLTLTQLIWDGSA--TLNDMDRTAAEAEADRYQLLADASNMALEVAK 145
           +   N++ T   A+L LTQ ++D S    L   +++A   +   YQ   D   + L  A 
Sbjct: 79  ANGVNSNAT--SASLQLTQTLFDMSKWRALTLQEKSAGIQDVT-YQ--TDQQTLILNTAT 133

Query: 146 IYLDATKASEILTLSENNLAIHKDIYRDIKK---RADSGIGSTADVTQVEARLAKAHSNL 202
            Y +   A + L+ +E   A  + IYR + +   R + G+ +  DV    ++     +N 
Sbjct: 134 AYFNVLSAIDALSYTE---AQKQAIYRQLDQTTQRFNVGLVAITDVQNARSQYDTVLANE 190

Query: 203 VAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQ-NAIPPTLENALNMAQENHPV-IKVAQA 260
           V A+NNL +     R++ G     L     D      P   NAL    EN  + +  A+ 
Sbjct: 191 VTARNNLDNALESLRQVTGNYYPELASLNVDSFKTDKPQAVNALLKEAENRNLSLLQARL 250

Query: 261 DVDAARFQYKQSKAPNYPTLSFEAAQ---------SWRNDAGGIEGSSDELSAMLRLRYN 311
             D AR Q +Q++  + PTLS  A+          S  N +   + +  +    L     
Sbjct: 251 SQDLAREQIRQAQDGHLPTLSLSASTGVSDTTYSGSKTNTSQYDDSNMGQNKVGLSFSLP 310

Query: 312 LYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSA 371
           LY GG  + + + A Y    + +  E   R V + +R S++ ++ ++         V SA
Sbjct: 311 LYQGGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASISSINAYKQAVVSA 370

Query: 372 SKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNL 427
             ++ +    Y +G RT++D+L+    L+ A++    ARY     +  +  A G L
Sbjct: 371 QSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLNIKQALGTL 426