Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score =  108 bits (271), Expect = 3e-28
 Identities = 94/427 (22%), Positives = 200/427 (46%), Gaps = 22/427 (5%)

Query: 16  AIALAIALSN-----PVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPK 70
           AI  A A SN     PV+  TL++++   +  +P +     Q    +   + +   ++P+
Sbjct: 22  AINTAFANSNQVGIAPVATTTLKESILFAIDRDPSISQQAAQLGIGQAQIDEARSGWMPQ 81

Query: 71  IDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRY 130
           I L+   G+      +SSG+           L+LTQL++D   T N + +++A+ ++ RY
Sbjct: 82  ISLNGSTGHS--QTTDSSGSLKNSAAWG---LSLTQLLYDFGKTNNSISQSSAQRDSYRY 136

Query: 131 QLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQ 190
           QL+   S++A + A  Y++  + S++L  +  N+   K++ +  K RAD+G+ ST+D  Q
Sbjct: 137 QLMGTLSDVAEKTALSYVEVKRYSDLLQAAIENVQALKNVEQLAKLRADAGVSSTSDELQ 196

Query: 191 VEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQE 250
              R+A   + +      L     +   L G +  +   P     A+ P   N ++ +  
Sbjct: 197 TRTRIAGMQATVAQYTAALNSARARLAVLTGMQAEAYS-PVPANLAVEPDSLNRIDYSL- 254

Query: 251 NHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRY 310
             P +  AQ    +A++  + +K+ ++PTLS +  ++ R ++       D++   L +  
Sbjct: 255 -IPAVMAAQNMERSAQYGVETAKSQHWPTLSLKGGRT-RYESDNRSYWDDQI--QLNIDA 310

Query: 311 NLYNGGSDSDRTESA-AYQLNRSKDLREKTFRTVEEG--LRLSWSALDLTLQQKQFLADH 367
            LY GG+ S R   A   +   S  + +  F  +++    +  W+     ++  +     
Sbjct: 311 PLYQGGAVSARVRQAEGARAMASSQVDQARFDVLQKASVAQADWTGARGRMEAGK---QQ 367

Query: 368 VDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNL 427
           +++A +    Y+ +Y + +R++ DLL+ E ++++A    + A Y    +     +A  NL
Sbjct: 368 LENALRARDVYKNEYTLSKRSINDLLSVEQDVWQATSAKIIAEYDGWSSAINYASAVDNL 427

Query: 428 LDALRVD 434
           +  + ++
Sbjct: 428 MPLIGIE 434