Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., transporter from Escherichia coli ECRC100

 Score =  128 bits (322), Expect = 3e-34
 Identities = 102/416 (24%), Positives = 203/416 (48%), Gaps = 12/416 (2%)

Query: 13  PLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLPKID 72
           PL   A A A++ PV+  +L++++    A NP +     Q    E   + +  A+ P + 
Sbjct: 31  PLPQWANAPAVT-PVAQLSLQESILRAFARNPGVTQQAAQIGIGEAQIDEAKSAWYPHVG 89

Query: 73  LDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQL 132
           L    G       +SSG  + +++     +TLTQL++D   T ND++   A  ++ R++L
Sbjct: 90  LTGNAGPS--RQTDSSGRLDNNVSYG---ITLTQLVYDFGKTNNDINLQTAARDSYRFKL 144

Query: 133 LADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTADVTQVE 192
           +A  +++A + A  Y++ ++   +   ++ N+   +++Y     RA++G+ S++D  Q +
Sbjct: 145 MATLTDVAEKTATAYMEVSRYQALCDAAQRNIHSLENVYNMAALRANAGLNSSSDELQAQ 204

Query: 193 ARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENALNMAQENH 252
            R+A   S L   Q  +     Q   L G +P ++  P A+    P +L+   N+  ++ 
Sbjct: 205 TRIAGMRSTLEQYQAQMASAKAQLAVLTGVQPEAIAAPPAELAEQPVSLK---NIDYQSI 261

Query: 253 PVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNL 312
           P++  A+    +A++  +++KA  +PTLS +  ++ R          D+L   L +   L
Sbjct: 262 PLVLAAENLRQSAQYGVEKTKAQYWPTLSIQGGKT-RYQTSDRSYWDDQL--QLNVNAPL 318

Query: 313 YNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSAS 372
           Y GG+ S + + A  Q   S    E+    V +   ++++       +++      +SA 
Sbjct: 319 YQGGAVSAQVQQAEGQQKISASQVEQAKLDVLQRASVAYANWTGARGREEAGLAQSESAH 378

Query: 373 KTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLL 428
           KT   Y+ +Y++G+R+L DLL  E ++F+A+   ++A Y    A      A  NL+
Sbjct: 379 KTRDVYQNEYKLGKRSLNDLLTVEQDVFQAQSAEINANYDGWVAAVNYAAAVNNLI 434