Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., outer membrane channel protein TolC from Dickeya dianthicola ME23

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 107/436 (24%), Positives = 189/436 (43%), Gaps = 30/436 (6%)

Query: 10  KGLPLKAIALAIA-LSNPVSAQTLEQAVSITLASNPELKSAF-NQFKSREYDAEASSGAY 67
           K LPL  I+L +   S    A+ L Q       +NP+L+SA  N+  + E   EA S + 
Sbjct: 3   KLLPL-LISLGLGGFSAASQAEDLLQVYQQAKTTNPDLRSAAANRDAAFEKINEARS-SL 60

Query: 68  LPKIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSA--TLNDMDRTAAEA 125
           LP++ L A   Y   N      + N ++T   A+L LTQ I++ S    L   ++ A   
Sbjct: 61  LPQLGLGADYTYN--NGYRDRKDVNNNVT--SASLQLTQSIFNMSLWRALTLQEKQAGIQ 116

Query: 126 EADRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKK---RADSGI 182
           +   YQ       + L  +  Y +  +A + L+      A  + IYR++ +   R + G+
Sbjct: 117 DVS-YQ--TSQQTLLLNTSTAYFNVLRAIDALSYVS---AQKQSIYRELDQTTQRFNVGL 170

Query: 183 GSTADVTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAI--PPT 240
            +  DV    ++     ++ V A+NNL +     R++ G     L     D+ +   P  
Sbjct: 171 VAITDVQNARSQYDSVLASEVTARNNLDNAMEILRQVTGNFYPQLAGLNIDRFSPQKPDA 230

Query: 241 LENALNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRN-DAGGIEGSS 299
           +   L  A+  +  +  A+   D AR Q + +++ + PTL+  A+    N +  G   + 
Sbjct: 231 VNGLLKEAENRNLSLLSARLSQDLAREQIRSAESGHLPTLNLTASTGVTNTNYSGSRVAD 290

Query: 300 DELSAM--------LRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSW 351
             LS          L     +Y+GG  S R + A +    S +  E   R+V + LR + 
Sbjct: 291 SNLSDTYVGQNQIGLSFSLPIYSGGGTSSRVKQAQHSFVASSESMESAHRSVIQTLRSAH 350

Query: 352 SALDLTLQQKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARY 411
           + +  ++         V SA  ++ +    YQ+G RT++D+L+    L+ A++    ARY
Sbjct: 351 NNISASISSVNAYKQAVISAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSGARY 410

Query: 412 AEQYAKYRVMNASGNL 427
                +  +  A G L
Sbjct: 411 DYLINQLNLKQALGTL 426