Pairwise Alignments

Query, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Outer membrane protein TolC from Azospirillum sp. SherDot2

 Score =  121 bits (303), Expect = 5e-32
 Identities = 108/417 (25%), Positives = 181/417 (43%), Gaps = 15/417 (3%)

Query: 24  SNPVSAQTLEQAVSI---TLASNPELKSAFNQFKSREYDAEASSGAYLPKIDLDAGIGYE 80
           + PV A   E  VS+      ++  L+ A    +S       S G + P + L A  G E
Sbjct: 19  AQPVLASPREDVVSLIGKVTETHDRLRGAEAAAESARNALRISHGGWYPTLSLSANGGRE 78

Query: 81  AINPAESSGNRNTDLTRKDATLTLTQLIWDGSATLNDMDRTAAEAEADRYQLLADASNMA 140
             N  + +G  NTDL  K  ++  TQLIWD  AT  D+ R           +      + 
Sbjct: 79  TTN--KPAGLPNTDLNAKQLSVRATQLIWDFDATNADIRRAQVSVVRADIAVERTRQELL 136

Query: 141 LEVAKIYLDATKASEILTLS---ENNLAIHKDIYRDIKKRADSGIGSTADVTQVEARLAK 197
           +E    Y    +A  +L  S   E+N+     +    + R   G G + DV Q +++LA 
Sbjct: 137 VEGLSAYATLVRAHRLLVFSRQSEDNIRRQTGLE---EVRLQEGYGFSTDVLQAKSQLAG 193

Query: 198 AHSNLVAAQNNLFDIYTQFRRLVGQEPVSL---EFPRADQNAIPPTLENALNMAQENHPV 254
           A +  VAA+  +    ++F+   G  P  L   E     + A+P +++ A++ A+ ++P 
Sbjct: 194 AQARRVAAEEAMQTALSRFQAYFGHVPFQLDGAEVLAMTKAALPLSMDAAVDEARRHNPR 253

Query: 255 IKVAQADVDAARFQYKQSKAPN-YPTLSFEAAQSWRNDAGGIEGSSDELSAMLRLRYNLY 313
           ++       AA+      +    YP +     ++ ++D  G  G  DEL   L++ ++L 
Sbjct: 254 LQELALTTAAAQEAVASVRGRTLYPRVEGYVERNIKSDVAGQPGRQDELLFKLQVTFSLN 313

Query: 314 NGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQQKQFLADHVDSASK 373
            G +  +    A   L  +        RTV E +R SW+ L+    Q + L D    A+ 
Sbjct: 314 TGLTAINSVRLAEADLRAADANWADQERTVLETVRNSWNRLESARSQVKLLNDQASLAAG 373

Query: 374 TVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYRVMNASGNLLDA 430
            +   R + ++G R+L+D+L+ E  L  AR D   A      A YR++ A G L  A
Sbjct: 374 FLDVARAERELGSRSLIDILSGETTLINARSDAAAAETELVLAGYRLLAAMGRLTAA 430