Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  119 bits (297), Expect = 2e-31
 Identities = 88/368 (23%), Positives = 154/368 (41%), Gaps = 16/368 (4%)

Query: 24  FCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGR---RLVML 80
           F NLY  Q +L   A  F +S     W    +TLA+++        S   GR   R V+ 
Sbjct: 20  FLNLYATQSILQTFATQFHISAKMAGWSITVTTLAVAITA---PFVSRLTGRFELRTVIS 76

Query: 81  TGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKAIGGY 140
                + V  L   YA+ F  +++ R + G+ +    + +VAY+ +        +    Y
Sbjct: 77  VAALLLAVPALMTAYADSFAEVLVWRFVEGMLIPVVFATSVAYIGDRWRGGTVTEVTSLY 136

Query: 141 IAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKPQRGLFF 200
           +A   LGG  GR   G++T+  GW+ A   +A+ +L     + +LLP   H +P RG   
Sbjct: 137 VAGTVLGGFAGRFVTGVMTEYAGWREAFELLAVLSLTVGGFIQFLLPAS-HGRPLRG--- 192

Query: 201 HHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRLVAEPYSLPIGIASLIFVCYL 260
                    +  + L  A  +G       V  ++  G  L   P+ L       ++  +L
Sbjct: 193 ---ETAFSAVFRKPLLAAYAVGFCVLFSQVAAFTYAGLYLGLPPFGLGPAALGTLYTVFL 249

Query: 261 AGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIALIEAIPAMLVGLILISFGAFFTHT 320
              +   +    ++       + + A + ++G  + L+ ++  ++VGL L S G F    
Sbjct: 250 LALIVIPVAGRLSKSRPHAELLSVAAGLGISGSALTLVPSLWCIVVGLALSSTGVFLAQA 309

Query: 321 LAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGGWE---MVTLGGLGLYF 377
            A A+ +  A   KA A  +YL  YY+GGS G       W+  GW     + +    L  
Sbjct: 310 AANAFTAATAGDNKAGAVGMYLTCYYLGGSCGAIVPALIWERWGWAGCVTLIIAFQILTL 369

Query: 378 ILFILGWR 385
           ++ + GW+
Sbjct: 370 LIALTGWK 377