Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Bcr/CflA family multidrug resistance transporter from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 87/346 (25%), Positives = 144/346 (41%), Gaps = 46/346 (13%)

Query: 17  AFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRR 76
           AFG   +  + YL  P  P +A  FA  E  +    AA  L LS+  + +   ++  GRR
Sbjct: 14  AFGPLAI--DFYL--PAFPAMAQAFATDEKHVQATLAAYFLGLSIGQLAYGPVADRFGRR 69

Query: 77  LVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKA 136
             ++ G+    +  LA  YA     LV+ R +  +   A   ++ A + ++  P A  K 
Sbjct: 70  KPLMFGVTLFTLASLACAYAPNLDTLVVARFIQALGGCAGMVLSRAIVSDKCDPVASAKV 129

Query: 137 IGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLP--IQQHF-- 192
               +    L  I   + GG+L +  GWQ   +A+++F+    L V+  LP  + +H   
Sbjct: 130 FSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPESLPEHIPR 189

Query: 193 KPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFA-----------LFVNLYSVMGFRLV 241
           +P  G      R  ++ L +R      L GG+  A           +F+ LY V      
Sbjct: 190 QPLSGAL----RQYLRLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGV-----P 240

Query: 242 AEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGA---LISMAGMLIALI 298
           AE Y    G  +  F+  L   ++++L A         P  +LG    L  +AG+++  +
Sbjct: 241 AEHYGWLFGTNAAGFI--LVAQVNARLLAKRG------PAFLLGRAVWLYLVAGLVLLGV 292

Query: 299 EAI-PAMLVGLI------LISFGAFFTHTLAYAWVSQKATQAKATA 337
            A+ PA L  L+      + S G    +  A A   Q A    A+A
Sbjct: 293 AALRPAQLWPLLVPLFICIASLGCIIPNASACAMSGQGARAGSASA 338