Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 9e-27
 Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 13/371 (3%)

Query: 12  VTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSE 71
           +T  LA  S +    +Y  QP+L  +A    V++ QI W+  A+    +L L+      +
Sbjct: 9   ITLLLATTSAMAVATVYFAQPLLESMAAELGVAQQQIGWVVGATQAGYALGLLLIVPLGD 68

Query: 72  AVGRRLVMLTGLF--AMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELS 129
            V R+ ++L  L   A+ ++G+ M  A  +  L+L  A+ G+ +A    V VA+     S
Sbjct: 69  LVDRKRLLLGQLLFAALALVGVGM--APNWAILLLALAITGL-MAVMVQVMVAHAASLAS 125

Query: 130 PQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLPIQ 189
           P   G+A+G   +   LG +  R+A G L D  GW+   +A A   +L AL++   LP  
Sbjct: 126 PGQQGQAVGTVTSGVVLGILLARLASGGLADLAGWRSVYLASAGLLMLLALVLWRSLPGG 185

Query: 190 Q--HFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRLVAEPYSL 247
           Q    +P          +L +H  +R L    + G + FA F  L+S M   L A P +L
Sbjct: 186 QPMGIRPGYRALIVAQFSLYRH--DRLLRQRGVFGVLIFAAFSVLWSAMVMPLSAAPLTL 243

Query: 248 PIGIASLIFVCYLAGTLSSKLTANWN--RRFSAIPGMMLGALISMAGMLIALIE-AIPAM 304
                 L  +  +AGTL++          R     G+ L AL++++ +  A +E ++ A 
Sbjct: 244 SHTEIGLFGLAGVAGTLAASHAGRLADLGRGECTTGVSL-ALLTLSWLPTAFVEHSLLAF 302

Query: 305 LVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGG 364
           ++G++++ F     H    + +        +     Y+  Y +G  LG     + + H G
Sbjct: 303 VLGVLMLDFAVQAVHVTNQSLLLAGRGAMASRLIGAYMCCYSLGSGLGAVLASWVFAHWG 362

Query: 365 WEMVTLGGLGL 375
           W  V   G+G+
Sbjct: 363 WVAVCGLGMGI 373



 Score = 27.7 bits (60), Expect = 6e-04
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 281 GMMLGALISMAGMLIA---LIEAIPAMLVGLILISFGAFFTHTLAYAWVSQKATQAKATA 337
           G +L A +++ G+ +A    I  +   + GL+ +       H  + A   Q+  QA  T 
Sbjct: 78  GQLLFAALALVGVGMAPNWAILLLALAITGLMAVMVQVMVAHAASLASPGQQG-QAVGTV 136

Query: 338 TALYLVHYYIGG-SLGGFYLLYCWQHGGWEMVTLGGLGLYFILFILGWR 385
           T+  ++   +   + GG   L      GW  V L   GL  +L ++ WR
Sbjct: 137 TSGVVLGILLARLASGGLADL-----AGWRSVYLASAGLLMLLALVLWR 180