Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  100 bits (248), Expect = 1e-25
 Identities = 92/374 (24%), Positives = 163/374 (43%), Gaps = 20/374 (5%)

Query: 22  LVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRRLVMLT 81
           L   + Y  QP+L  +A  F +S +   ++  A+ L  +  L+      +   RR+++++
Sbjct: 22  LAVASNYYAQPLLDTIARAFNLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRMLIVS 81

Query: 82  GLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEEL----SPQAFGKAI 137
            +  +   G+ +  + Q     LT  ++G AL    SV    +V       SP+  GK +
Sbjct: 82  -MTLLAAGGMLITASSQS----LTMMIVGTALTGLFSVVAQILVPLAATLASPEKRGKVV 136

Query: 138 GGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKPQRG 197
           G  ++   LG +  R   GLL    GW+      ++  ++ AL +   LP     K +  
Sbjct: 137 GTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALALWRGLP---KVKQENH 193

Query: 198 LFFHHNRALVKHL--QNRTLWLAMLIGGVNFALFVNLYSVMGFRLVAEPYSLPIGIASLI 255
           L +    A V  L  Q++ L    L+G   FA F  L++ M F L A P++   G+  L 
Sbjct: 194 LNYPQLLASVFSLFTQDKLLRTRALLGCFTFANFSILWTSMAFLLAAPPFNYSEGVIGLF 253

Query: 256 FVCYLAGTLSSK----LTANWNRRFSAIPGMMLGALISMAGMLIALIEAIPAMLVGLILI 311
            +   AG L ++    L        +   G++L  L+S A +    I  + A++VG++++
Sbjct: 254 GLAGAAGALGARPAGGLADKGKSHLTTSAGLIL-LLLSWAAIWYGHISVL-ALIVGILVL 311

Query: 312 SFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGGWEMVTLG 371
                  H      + +   +A+   TA Y+  Y+IGG+ G       WQH GW  V   
Sbjct: 312 DLTVQGVHITNQTVIYRVKPEARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWSGVCAI 371

Query: 372 GLGLYFILFILGWR 385
           G  +  +  ++ WR
Sbjct: 372 GAIVATLNLLVWWR 385