Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  207 bits (526), Expect = 6e-58
 Identities = 117/371 (31%), Positives = 200/371 (53%), Gaps = 8/371 (2%)

Query: 2   IELHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSL 61
           I+  +PQ+++VT AL       F  LY  QP+LP L++ F VS    +   + ST  L++
Sbjct: 28  IKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSHEFGVSPASSSISLSISTGMLAI 87

Query: 62  CLVPWAVTSEAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAV 121
            L+     S+A+GR+ VM+T L    V  L       +  +++ RAL+G++L+  A+V +
Sbjct: 88  GLLFTGPLSDAIGRKQVMVTALMLASVCTLLSTMMTSWHGILVMRALIGLSLSGVAAVGM 147

Query: 122 AYMVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALL 181
            Y+ EE+ P     ++G YI+ NS+GG++GR+  G+ TD   W+ A+  +  F L  AL+
Sbjct: 148 TYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLSGVFTDFFSWRIALAVIGCFALASALM 207

Query: 182 VAYLLPIQQHFKP----QRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMG 237
              +LP  +HF+P     + LF +       H +++ L    L+G +    FV L++ +G
Sbjct: 208 FWKILPESRHFRPTSLRPKTLFINFR----LHWRDKGLPRLFLMGFLLMGAFVTLFNYIG 263

Query: 238 FRLVAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIAL 297
           +RL+  P+ L   +  L+ V YL GT SS        R+   P +++   + + G+L+ L
Sbjct: 264 YRLMLSPWHLNQAVVGLLSVAYLTGTWSSPKAGAMTARYGRGPVLLVFTGVMLLGLLLTL 323

Query: 298 IEAIPAMLVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLL 357
             ++  +  G++L S G F  H++A +W+  +A +AK  A++LYL  YY+G S+ G    
Sbjct: 324 FSSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKGQASSLYLFSYYLGSSIAGTLGG 383

Query: 358 YCWQHGGWEMV 368
             W + GW  V
Sbjct: 384 VFWHNYGWNGV 394