Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  104 bits (259), Expect = 5e-27
 Identities = 86/391 (21%), Positives = 165/391 (42%), Gaps = 5/391 (1%)

Query: 7   PQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPW 66
           P+ +   FA A G  L   N+Y  QP+L  LAN F +S   +  +  A+ +  +L L+  
Sbjct: 13  PRSMVWLFATASG--LSVANVYYAQPLLDALANDFGISHAAVGGVVTATQIGCALALLLV 70

Query: 67  AVTSEAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVE 126
               + V RR +M   L A+ V  +++  A+    L++     G+   A     +AY   
Sbjct: 71  VPLGDKVDRRRLMAVQLIALVVALVSVSMAQSSSALLIGMLATGMLGTAMTQGLIAYAAS 130

Query: 127 ELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALLVAYLL 186
             SP   G+ +G       +G +  R+  G ++D  GW+   +  A   L+ AL + + L
Sbjct: 131 AASPHEQGRVVGAAQGGVFIGLLLARVFAGGISDIAGWRGVYLCAAALMLMIALRLWWRL 190

Query: 187 PIQQHFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRLVAEPYS 246
           P                  L    Q + L +  ++  + FA F   +S +   L A P++
Sbjct: 191 PALPAVTATMSYPRLIGSMLTLLRQEKVLQIRGVLALLMFASFNIFWSALVLPLSAPPFN 250

Query: 247 LPIGIASLIFVCYLAGTLSSKLTANW-NRRFSAIPGMMLGALISMAGMLIALIE-AIPAM 304
                     +    G L++     W +R ++        +++ +A   ++L++ ++  +
Sbjct: 251 FSHTAIGAFGLAGAVGALAAGRAGRWADRGYAQRSSAAALSILLLAWWPLSLMDRSLGIL 310

Query: 305 LVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGG 364
           L+G+IL+  G    H    + + +   +A +    LY++ Y +G  LG       +   G
Sbjct: 311 LIGIILLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFYAVGSGLGALGTTMTYACAG 370

Query: 365 WEMVTLGGLGLYFILFILGWRLSRQNKQTPQ 395
           W  V L G  +  +  +  W L+R + + P+
Sbjct: 371 WPGVCLLGASVSLLALVFWW-LTRASHRCPR 400