Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., Inner membrane transport protein YnfM from Escherichia coli ECOR38

 Score =  209 bits (533), Expect = 9e-59
 Identities = 120/392 (30%), Positives = 207/392 (52%), Gaps = 8/392 (2%)

Query: 2   IELHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSL 61
           I+  +PQ+++VT AL       F  LY  QP+LP L+  F ++    +   + ST  L++
Sbjct: 27  IKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAI 86

Query: 62  CLVPWAVTSEAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAV 121
            L+     S+A+GR+ VM+T L    +  L       +  +++ RAL+G++L+  A+V +
Sbjct: 87  GLLFTGPLSDAIGRKPVMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGM 146

Query: 122 AYMVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALL 181
            Y+ EE+ P     ++G YI+ NS+GG++GR+  G+ TD   W+ A+ A+  F L  AL+
Sbjct: 147 TYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGCFALASALM 206

Query: 182 VAYLLPIQQHFKP----QRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMG 237
              +LP  +HF+P     + LF +       H ++R L L    G +    FV L++ +G
Sbjct: 207 FWKILPESRHFRPTSLRPKTLFINFR----LHWRDRGLPLLFAEGFLLMGSFVTLFNYIG 262

Query: 238 FRLVAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIAL 297
           +RL+  P+ +   +  L+ + YL GT SS        R+   P M+    + + G+L+ L
Sbjct: 263 YRLMLSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGLLMTL 322

Query: 298 IEAIPAMLVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLL 357
             ++  +  G++L S G F  H++A +W+  +A +AK  A++LYL  YY+G S+ G    
Sbjct: 323 FSSLWLIFAGMLLFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAGTLGG 382

Query: 358 YCWQHGGWEMVTLGGLGLYFILFILGWRLSRQ 389
             W + GW  V      +  I  ++G RL R+
Sbjct: 383 VFWHNYGWNGVGAFIALMLVIALLVGTRLHRR 414