Pairwise Alignments

Query, 405 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Inner membrane transport protein YnfM from Acinetobacter radioresistens SK82

 Score =  216 bits (550), Expect = 9e-61
 Identities = 123/383 (32%), Positives = 212/383 (55%), Gaps = 11/383 (2%)

Query: 2   IELHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSL 61
           IE  +  +  +  +L    F +F +LY  QPM+P+LA  FA+S T  ++  + ST+AL+L
Sbjct: 11  IEYGTRPFFAILLSLFLAGFAIFSSLYCVQPMMPFLAKFFAISPTHSSFPLSFSTIALAL 70

Query: 62  CLVPWAVTSEAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAV 121
            L+   + S+  GR+ VM   LF+  ++ L   +   +   + TR L+G+A++  ASVA+
Sbjct: 71  GLLFAGLISDRYGRKQVMAISLFSTSILLLVSSFLPYWEVFLSTRMLIGLAVSGVASVAM 130

Query: 122 AYMVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALL 181
            Y+ EE++ +  G A+G YI+  ++GG++GR+  G+L D + WQ A + + +  L+ A++
Sbjct: 131 TYIGEEIAQKDVGFAMGLYISGTAIGGMSGRLIAGVLLDFISWQTATMIIGVLNLIIAIV 190

Query: 182 VAYLLPIQQHFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRLV 241
               LP  +HFKP    F    ++  K+L +  L L    G +    FV +++ + + L+
Sbjct: 191 FYIALPASRHFKPYPINFSRFKQSFTKNLSDSKLRLLFAEGFLLMGCFVTVFNYISYHLL 250

Query: 242 AEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRF---SAIPGMMLGALISMAGMLIALI 298
            +P+ L      LI + YL+G  SS   A W R++     +P M +  ++   G+ I LI
Sbjct: 251 EKPFELSQTWIGLISIAYLSGIYSSPRAAGWGRKYGRGKVLPAMFICMIL---GLWIMLI 307

Query: 299 EAIPAMLVGLILISFGAFFTHTLAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLY 358
            +I  +L+GL++ +F  F  H+ A +WVS +A Q +A  ++LYL  YY+G S+ G     
Sbjct: 308 PSIWCILLGLLIFTFSFFAAHSTASSWVSVQALQYRAVGSSLYLFCYYLGSSVLGSSGGL 367

Query: 359 CWQHGGWEMVTLGGLGLYFILFI 381
            W++ GW     GGL +   LF+
Sbjct: 368 VWENWGW-----GGLTVIITLFL 385



 Score = 37.4 bits (85), Expect = 8e-07
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 10/175 (5%)

Query: 11  KVTFALAFGSFLVFCNLYLFQPMLPYLANH-FAVSETQINWLFAA--STLALSLCLVPWA 67
           K+    A G  L+ C + +F  +  +L    F +S+T I  +  A  S +  S     W 
Sbjct: 223 KLRLLFAEGFLLMGCFVTVFNYISYHLLEKPFELSQTWIGLISIAYLSGIYSSPRAAGWG 282

Query: 68  VTSEAVGRRLVMLTGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYM-VE 126
                 GR  V L  +F   ++GL ++     W ++L   +   +  A  S A +++ V+
Sbjct: 283 ---RKYGRGKV-LPAMFICMILGLWIMLIPSIWCILLGLLIFTFSFFAAHSTASSWVSVQ 338

Query: 127 ELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTDALGWQHAVVAMAIFTLLGALL 181
            L  +A G ++  Y+    LG      +GGL+ +  GW    V + +F  LG ++
Sbjct: 339 ALQYRAVGSSL--YLFCYYLGSSVLGSSGGLVWENWGWGGLTVIITLFLGLGLII 391