Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., HTH-type transcriptional regulator CynR from Xanthobacter sp. DMC5

 Score =  130 bits (326), Expect = 5e-35
 Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 8/292 (2%)

Query: 8   MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67
           ME+R LR FV V     F+ AA+ L+  QP +S ++K+ E +LGV L  R   +  LT  
Sbjct: 1   MELRTLRAFVEVVRQGGFSPAAKVLNATQPTVSKAVKQLEDELGVPLLDRIGHRSQLTAA 60

Query: 68  GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127
           GE++   A  +L +       +++L+G+ +G +RLG P +  S  F  +   F+S +P +
Sbjct: 61  GEIVYRRALTLLAEREGLVAELEDLRGLRRGSLRLGLPPLGASTLFAPLFAVFRSRYPGI 120

Query: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLP--DDLAADPLLSSQMVAVVGKNHELAER 185
           ++ + E G++ +  MLL GE+++   L   LP  D      +    ++AV+  +H LA R
Sbjct: 121 EIRLTEHGSKRLEEMLLEGEVELAGSL---LPAKDGFDGQAVRCEPLMAVLPVSHPLAGR 177

Query: 186 RHLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAIT 245
             +T A+  +   ++F+ G+     ++  C  + F+   +  +  +  I+ I      + 
Sbjct: 178 ERVTIADLADFPFILFEGGFALNQVLEDACARNGFSPQVAARSGQIDFIVEIAGAGLGVA 237

Query: 246 ALLELVT--SNEPEVKAIPF-EPPVWLDLALAWRKEGYLSNADRTFIEFVKK 294
            L + +      P V+     EP     +A+ WRK  YLS+A R ++E  ++
Sbjct: 238 FLPKTIAYQRRTPAVRLSELAEPGTEWHMAIVWRKGSYLSHAARAWLELTRE 289