Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 7e-34
 Identities = 81/287 (28%), Positives = 139/287 (48%), Gaps = 3/287 (1%)

Query: 9   EVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHEG 68
           E++ +R FV +AE  SF  AA+ LH++QPALS  IKK E+ LG +L +R  R+V+LT  G
Sbjct: 4   ELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVG 63

Query: 69  EVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNLK 128
              L  A+R+L    D+ L++ EL     G+V L        YF P +I  +   +P ++
Sbjct: 64  RDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIR 123

Query: 129 MTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRHL 188
           + +++         +L GE D G+ +      D+    L+    V    ++H LA R  +
Sbjct: 124 IRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANRASV 183

Query: 189 TFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL- 247
           T+ E  ++ L+       +R  +D           + +E   L   L +V+    ++A+ 
Sbjct: 184 TWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGMVEAGLGVSAMP 243

Query: 248 -LELVTSNEPEVKAIP-FEPPVWLDLALAWRKEGYLSNADRTFIEFV 292
            L +  ++ P + ++P  EP V   L L +R+   LS A   F+  +
Sbjct: 244 SLAMPNADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSIL 290