Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator YnfL from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  112 bits (281), Expect = 8e-30
 Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 9/292 (3%)

Query: 8   MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67
           +E+R LR+FV VAE   F  AA +L+I+QP LS  I+  EQQ+G  L  R  R VALT  
Sbjct: 3   IELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALTAA 62

Query: 68  GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQI---IMAFKSHF 124
           G   L  ++ IL  VNDA    + L     GE+R+G  S   + F   +      F+  +
Sbjct: 63  GRQFLVDSRHILSLVNDAAARAERLHQGEAGEIRIGFTS--SAPFIRAVSHTFSLFRQSY 120

Query: 125 PNLKMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAE 184
           P + M   E  T+     L  G LDIG++ N  LPD L  + +L   ++A++ + H LA+
Sbjct: 121 PGVHMQTREMNTREQIAPLNEGVLDIGLLRNTPLPDTLNREVILHEPLMAMIPREHRLAQ 180

Query: 185 RRHLTFAEFFEHELVMFKP--GYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEY 242
           +  ++  E  E   V F P  G    D I  + R +  +   + E      I+ +V    
Sbjct: 181 KPVVSLTELAEEPFVFFDPHVGTGLYDDILGLMRRYNLSPTITQEVGEAMTIIGLVAAGL 240

Query: 243 AITAL-LELVTSNEPEVKAIPF-EPPVWLDLALAWRKEGYLSNADRTFIEFV 292
            ++ L          E++ +P  E     ++ L W K    S+A + F + +
Sbjct: 241 GVSILPASFKRVQMSEMRWVPLAEEDAVSEMWLVWPKHHEQSHAVQRFCQLL 292