Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., predicted DNA-binding transcriptional regulator (RefSeq) from Escherichia coli BW25113

 Score =  126 bits (317), Expect = 6e-34
 Identities = 82/283 (28%), Positives = 143/283 (50%), Gaps = 3/283 (1%)

Query: 9   EVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHEG 68
           E+  ++ FV +AE  SF  AA+ L+I QPAL+  IKK E+ L V LF+R  RKV LT  G
Sbjct: 4   ELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAG 63

Query: 69  EVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNLK 128
           + LL  A+ ++++ ++    + ++    +G V L        YF P  I  F   +PN+K
Sbjct: 64  KRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIK 123

Query: 129 MTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRHL 188
           + ++E GT +    +L  E D G+ +N+     +   PL++   V    ++H LA+++ +
Sbjct: 124 VRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLV 183

Query: 189 TFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITALL 248
            + E   ++++  +    +R  I++   +  +  D+ +E   L   L +V+    I+AL 
Sbjct: 184 EWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALP 243

Query: 249 ELVTSNEP--EVKAIPF-EPPVWLDLALAWRKEGYLSNADRTF 288
            L   + P   +  IP  EP +   L +  RK+  LS A   F
Sbjct: 244 GLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERF 286