Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Ribosomal RNA large subunit methyltransferase F from Pseudomonas putida KT2440

 Score =  318 bits (815), Expect = 1e-91
 Identities = 159/314 (50%), Positives = 214/314 (68%), Gaps = 11/314 (3%)

Query: 46  KSGLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLVLHY 105
           K  LHPRNRH+G+YDFP+LIK  P+L    + NP G+ +I+FA+P +V++ N+ALL   Y
Sbjct: 5   KPTLHPRNRHQGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQY 64

Query: 106 GVTYWDIPEGFLCPPIPGRADYIHRVADLLLKGN--PQLNHSQVRALDIGVGANCIYPIV 163
           G+ +WDIP  +LCPPIPGRADYIH  ADLL   N       +QVRALDIGVGANCIYP++
Sbjct: 65  GIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPRGAQVRALDIGVGANCIYPLL 124

Query: 164 GVTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANERYTV 223
           G ++Y W ++GSD+DPV++  A  IVQ+N  L   I  R Q N  HI +G++   ER+ +
Sbjct: 125 GYSDYRWRFLGSDIDPVALASAKAIVQANG-LGKAITLRQQANRAHILSGLLQEGERFDL 183

Query: 224 TTCNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGE 283
           T CNPPFHAS  +A +G+QRK  NL   Q  K +L         LNFGGQ  ELWC GGE
Sbjct: 184 TLCNPPFHASRDEATRGSQRKWKNL-GKQDPKRKLPV-------LNFGGQNNELWCEGGE 235

Query: 284 AAFIGKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRF 343
             F+ ++  ES Q+A++VLWF +L+SK  N+ G++  L+K GA+++ +IEM QGQK SR 
Sbjct: 236 IRFVTQLIGESVQYAERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRM 295

Query: 344 IAWSFQNAEQRKLW 357
           +AWSF +   R+ W
Sbjct: 296 VAWSFLDDAARQAW 309