Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  322 bits (824), Expect = 1e-92
 Identities = 161/314 (51%), Positives = 210/314 (66%), Gaps = 13/314 (4%)

Query: 42  VAAVKSGLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALL 101
           ++A K GLHPRNRH+ +YD  AL +  PEL S +++ P G+ +++FA+P +VK LNKALL
Sbjct: 1   MSAQKPGLHPRNRHQHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALL 60

Query: 102 VLHYGVTYWDIPEGFLCPPIPGRADYIHRVADLLLKGNPQLNHSQVRALDIGVGANCIYP 161
              Y VT+WDIP GFLCPP+PGRADYIH +ADLL +    +  +Q   LD+GVGANCIYP
Sbjct: 61  AHFYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGETTGSI-PAQATILDVGVGANCIYP 119

Query: 162 IVGVTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANERY 221
           ++GV EYGW + GS+V   ++  A  I+Q+N+ L   I  R QK+   IF GII  NE Y
Sbjct: 120 LIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRRQKDPAAIFTGIIHKNEFY 179

Query: 222 TVTTCNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPG 281
             T CNPPFH S A A+ G++RK  NL  N+               LNFGGQ+ ELWC G
Sbjct: 180 DATLCNPPFHDSAAAARAGSERKRRNLGQNK------------DDALNFGGQQQELWCEG 227

Query: 282 GEAAFIGKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKIS 341
           GE AFI KM  ESQ F +QVLWF TL+S+G+N+  + + L + GA  +   EMAQGQK S
Sbjct: 228 GEVAFIKKMIAESQSFRRQVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQS 287

Query: 342 RFIAWSFQNAEQRK 355
           RFIAW+F + +QR+
Sbjct: 288 RFIAWTFMDDDQRR 301