Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Erwinia tracheiphila SCR3

 Score =  304 bits (778), Expect = 2e-87
 Identities = 147/310 (47%), Positives = 204/310 (65%), Gaps = 12/310 (3%)

Query: 46  KSGLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLVLHY 105
           K  LHPRNRHRG+YDF ALI   P L   V  N  G  +++FA+P +V++LN+ALL   Y
Sbjct: 7   KMQLHPRNRHRGRYDFAALIASHPALVEFVSVNACGDESVDFANPAAVRVLNQALLRHFY 66

Query: 106 GVTYWDIPEGFLCPPIPGRADYIHRVADLLLKGNPQLNHSQVRALDIGVGANCIYPIVGV 165
            + +W +P+G LCPP+PGRADYIH +ADLL + N       +  LDIG GANCIYP++G 
Sbjct: 67  QIAHWTLPDGSLCPPVPGRADYIHYLADLLAEDNKSQVPRNINVLDIGCGANCIYPLIGQ 126

Query: 166 TEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANERYTVTT 225
            EYGW + GS+V+  +++ A+ ++ +N  L   +  R QK+ Q IFNGI+  NE Y    
Sbjct: 127 YEYGWRFTGSEVNEAAMRSATSVIAANPGLARQVRLRRQKDPQAIFNGIVHKNEHYHAVM 186

Query: 226 CNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAA 285
           CNPPFHAS +DA++G+QRK+ NL  + R            + LNFGGQ+ ELWC GGE A
Sbjct: 187 CNPPFHASASDAREGSQRKVRNLGLDSR------------APLNFGGQQDELWCEGGEKA 234

Query: 286 FIGKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIA 345
           FI +M  ES   A+Q +WF +L+S+ +N+  + + LE+ GA ++  ++MAQGQK SRFIA
Sbjct: 235 FISRMIAESVLVARQCIWFTSLVSRRENLPDLWRALEQAGAVAVRTVDMAQGQKQSRFIA 294

Query: 346 WSFQNAEQRK 355
           W+F    QR+
Sbjct: 295 WTFLQQPQRE 304