Pairwise Alignments

Query, 362 a.a., ribosomal RNA large subunit methyltransferase F from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Predicted SAM-dependent methyltransferase from Enterobacter asburiae PDN3

 Score =  319 bits (818), Expect = 5e-92
 Identities = 158/314 (50%), Positives = 205/314 (65%), Gaps = 12/314 (3%)

Query: 42  VAAVKSGLHPRNRHRGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALL 101
           + A K GLHPRNRHR +YD  AL    P LQ ++++ P G+ ++NFADP +VK+LNKALL
Sbjct: 1   MTAQKPGLHPRNRHRSRYDMNALCLSCPPLQDYLVQTPAGEPSVNFADPQAVKMLNKALL 60

Query: 102 VLHYGVTYWDIPEGFLCPPIPGRADYIHRVADLLLKGNPQLNHSQVRALDIGVGANCIYP 161
              YGV +WDIPEGFLCPP+PGRADY+H +ADLL +GN  +   Q   LDIG GAN IYP
Sbjct: 61  AHFYGVAHWDIPEGFLCPPVPGRADYVHHLADLLAEGNEGVVPQQATILDIGTGANLIYP 120

Query: 162 IVGVTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHIFNGIIGANERY 221
           ++G  EY W + GS++   +   A  I+ +N  L   I  R QK++  IFNGII  NE Y
Sbjct: 121 LIGAHEYQWRFTGSEIGDEAFASAQAIISANPGLSRAIRLRRQKDAASIFNGIIHKNESY 180

Query: 222 TVTTCNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPG 281
             T CNPPFH S A A+ G++RK  NL   +             + LNFGGQ+ ELWC G
Sbjct: 181 DATMCNPPFHDSAASARAGSERKRRNLGQAE------------DAALNFGGQQQELWCEG 228

Query: 282 GEAAFIGKMAVESQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKIS 341
           GE AFI +M  ES+QF +QV WF TL+S+GDN+  + + L + GA  +   EMAQGQK S
Sbjct: 229 GEVAFILRMIAESKQFGRQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQS 288

Query: 342 RFIAWSFQNAEQRK 355
           RFIAW+F +  +R+
Sbjct: 289 RFIAWTFMDNHKRR 302