Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 15/232 (6%)

Query: 6   GLGLIIALAGCVTVTETAGN------------ATQSDPTEM---AEARIALGLGYLENGS 50
           G+ +   LAGCV+   T  +             T+SD +     A  R+ L  GY E G 
Sbjct: 22  GVAVTFLLAGCVSTRTTTTSLADTSSGKGVDIVTESDESSRQRRARLRMELASGYFEQGQ 81

Query: 51  MIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFG 110
              A + +++AL   P+   +       Y  + +   A   +R A++ +P++ N  +N+G
Sbjct: 82  TNVALDEIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYG 141

Query: 111 TFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDP 170
             LC+Q  Y  A   F  A+  P Y   + +    G+C LKAG+   A    ++A + D 
Sbjct: 142 WLLCQQNRYGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDA 201

Query: 171 NRLLSILQLTKMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGN 222
           +  +    L  +  +  +++ A+  +  +N        +L L I++E++  N
Sbjct: 202 SNPVVGFNLALVLAQREEWSRAQFYIRRVNNSPSASAETLWLGIKIERKLNN 253