Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 44.3 bits (103), Expect = 5e-09
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 40  ALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGEN-DSARKMYRTALSE 98
           A G+ Y       KA  ++ +AL+ +PD       + + +   G N +  RK+   A+  
Sbjct: 406 ARGIAYERAKQWSKAEPDMLEALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLIERAVEL 465

Query: 99  HPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVE-QPYYYLISASYENAGLCALKAGKTDN 157
            P +G ++++ G  L + GE+  A +Y  RA E +P    ++   E+ G    + G+   
Sbjct: 466 RPNDGAIVDSLGWALYRMGEFQAAVKYLERASELKPEDPTVN---EHLGDAFWQVGRDTE 522

Query: 158 AREYFKRAIDHDP 170
           AR  ++RA+  DP
Sbjct: 523 ARYQWQRAMGLDP 535



 Score = 23.9 bits (50), Expect = 0.007
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 13/98 (13%)

Query: 144 NAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTKMEIEAGDYTPARLRLMD----L 199
           +AGL    AG+ D A  +FK A+ +         Q +   +EA      R   MD    L
Sbjct: 172 HAGLMGDLAGRPDVAEAHFKAALAN---------QTSVRTVEAAGTWYQRSGRMDEAKAL 222

Query: 200 NQRYGYQKASLKLLIELEKRAGNSALEQKYQTLLNSLS 237
            +RY  + A   LL    + A  + L +  +T  + L+
Sbjct: 223 YERYHAEHADRSLLDGRRQLAAGTNLPRVVETARDGLA 260