Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 56/231 (24%), Positives = 92/231 (39%), Gaps = 38/231 (16%)

Query: 5   FGLGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQH 64
           FGLGL+++  G      +      +  ++  EAR  LGL     G + +A +   KA + 
Sbjct: 108 FGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAEL 167

Query: 65  APDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQ 124
           AP   ++  ++     A G    A   +  AL+  P +  V  + G  L K G  + A +
Sbjct: 168 APALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAE 227

Query: 125 YFRRAVE--------------------------QPYYYLI------SASYENAGLCALKA 152
            FRRA+E                          + Y  +I      ++++ N+G+   K 
Sbjct: 228 CFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKL 287

Query: 153 GKTDNAREYFKRAIDHDPNRLLSILQLTKMEIEAG------DYTPARLRLM 197
           G+ D A   + R ++ DP    + L   K   EAG      D   + LRLM
Sbjct: 288 GQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLM 338



 Score = 40.8 bits (94), Expect = 8e-08
 Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 24  GNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVG 83
           G A   +P   AE R  +G+   + G   +A E   +A++  P       ++    + +G
Sbjct: 196 GRALALEPNH-AEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLG 254

Query: 84  ENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYE 143
             + A ++Y   ++  P + +   N G    K G+ D A   + R +E         ++ 
Sbjct: 255 RLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPAN--GPAWL 312

Query: 144 NAGLCALKAGKTDNAREYFK---RAIDHDPNRLLSILQLTKM 182
           N G    +AG+ ++A + F+   R +  D + L  ++ L K+
Sbjct: 313 NRGKALYEAGRVEDALDSFRSALRLMPDDADALCELVNLRKV 354