Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 12/139 (8%)

Query: 36  EARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTA 95
           +  + LG+ Y++ G++ +  E LE++L  APD  +    +   Y  V + D A  +    
Sbjct: 85  DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKV 144

Query: 96  LSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAV-----EQPYYYLISASYENAGLCAL 150
              +P N NV    G  L   G +D A   F+ A+     E   +  I+ SYE       
Sbjct: 145 AEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYE------- 197

Query: 151 KAGKTDNAREYFKRAIDHD 169
           + G+ + A  +FK+A + D
Sbjct: 198 QMGRHEEALPHFKKANELD 216



 Score = 29.6 bits (65), Expect = 5e-05
 Identities = 26/125 (20%), Positives = 47/125 (37%)

Query: 7   LGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAP 66
           LG+     G V         + +D  +  +    LGL Y++      A   L K  +  P
Sbjct: 90  LGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP 149

Query: 67  DYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYF 126
             +  +  +    + +G  D A   ++ AL   P  G V         + G ++ A  +F
Sbjct: 150 INFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHF 209

Query: 127 RRAVE 131
           ++A E
Sbjct: 210 KKANE 214